DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60A and HSP60

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_189041.1 Gene:HSP60 / 821983 AraportID:AT3G23990 Length:577 Species:Arabidopsis thaliana


Alignment Length:577 Identity:328/577 - (56%)
Similarity:436/577 - (75%) Gaps:13/577 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRLPVSL---------ARSSISRQLAMRGY-AKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKG 55
            |:|...:|         ||...||....|.| ||:::||.|.||:||:||:.|||||.|||||||
plant     1 MYRFASNLASKARIAQNARQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKVTMGPKG 65

  Fly    56 RNVIIEQSWGSPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 120
            |||:||||||:||:||||||||||||.|||.:|:||.||:.|||.||:.||||||.||||.|||.
plant    66 RNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIF 130

  Fly   121 KEGFEKISKGANPVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEA 185
            .||.:.::.|.|.:::|||:.:||:.|..|||:.:|.:||.||||||.||||||::.||.||::|
plant   131 AEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGTISANGEREIGELIAKA 195

  Fly   186 MKKVGRDGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSV 250
            |:|||::||||::|||||.:||||:||||.||||.|||||.:.|..|.|..|.|:|:.||||||:
plant   196 MEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISSI 260

  Fly   251 QSIIPALELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIA 315
            .||:..||||..:::||:|::||::.:||:||::|:|:.|::|.|:||||||:|||:.|.|:|..
plant   261 NSIVKVLELALKRQRPLLIVSEDVESDALATLILNKLRAGIKVCAIKAPGFGENRKANLQDLAAL 325

  Fly   316 SGGIVFGDDADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRANQIKDQIEDTTSE 380
            :||.|..|:..: .||.|.:|.||...:|.::||||::|.|.|.|..:..|..||:..||.:||:
plant   326 TGGEVITDELGM-NLEKVDLSMLGTCKKVTVSKDDTVILDGAGDKKGIEERCEQIRSAIELSTSD 389

  Fly   381 YEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIE 445
            |:|||||||||:|:.|||:|::||:||.||.||||||.||||||:|||||||:||||.|||....
plant   390 YDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGILPGGGVALLYAAR 454

  Fly   446 KLEGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAK-VENQAGDYGYDALKGEYGNL 509
            :||.:.|.|.|||:||:|::.||:.|..|||.||||:||::|.| :|....|.||||.||||.::
plant   455 ELEKLPTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDM 519

  Fly   510 IEKGIIDPTKVVRTAITDASGVASLLTTAEAVVTEIPKEDGAPAMPGMGGMGGMGGM 566
            ::.|||||.||:|||:.||:.|:|||||.||||.::||::......| .||||||||
plant   520 VKAGIIDPLKVIRTALVDAASVSSLLTTTEAVVVDLPKDESESGAAG-AGMGGMGGM 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 314/538 (58%)
GroEL 24..544 CDD:239460 307/520 (59%)
HSP60NP_189041.1 GroEL 34..554 CDD:239460 307/520 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 580 1.000 Domainoid score I40
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1626
Inparanoid 1 1.050 652 1.000 Inparanoid score I167
OMA 1 1.010 - - QHG61846
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 1 1.000 - - mtm993
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - LDO PTHR45633
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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