DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and TCP-1

DIOPT Version :10

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_188640.1 Gene:TCP-1 / 821544 AraportID:AT3G20050 Length:545 Species:Arabidopsis thaliana


Alignment Length:601 Identity:132/601 - (21%)
Similarity:239/601 - (39%) Gaps:157/601 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQNI 89
            |.:.|.:||...:.....:::.|..::||.|.:.::....|...||.||.|:.:.:|:    ::.
plant    13 DRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEV----EHP 73

  Fly    90 GAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETVKDNLKTM 154
            .||::.::|...:.|.|||||:..::|..:.|...:.:....:|..|..|..||   ::::.|.:
plant    74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA---MRESCKYI 135

  Fly   155 SRPVSTP-EEIAQVATISA----------NGD-QAIGNLISEAMKKVGRDGVITVKDGKTLTDEL 207
            ...:.|. |::.:|..|:.          :|| ....||:.||        |::||    :|::.
plant   136 EEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEA--------VLSVK----MTNQR 188

  Fly   208 -EV---IEGMKF---------DRGYISPYFINSSKGAKVEFQDALLLLSEKKIS----------- 248
             |:   |:|:..         |...::.|.:|:.:.|    |...|.:|..||:           
plant   189 GEIKYPIKGINILKAHGQSARDSYLLNGYALNTGRAA----QGMPLRVSPAKIACLDFNLQKTKM 249

  Fly   249 --SVQSII-PALELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDN------ 304
              .||.:: ...||...:::     ..|:..|.:..|    ||.|..| .:...|..|.      
plant   250 QLGVQVVVNDPRELEKIRQR-----EADMTKERIEKL----LKAGANV-ILTTKGIDDMALKYFV 304

  Fly   305 ----------RKSTLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVV---ITKDDTLLLKG 356
                      ||..:..:|.|:|..:....||:...|....:.||...|||   |..||.:|:||
plant   305 EAGAIAVRRVRKEDMRHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADDDVILIKG 369

  Fly   357 KGKKDDVLRRANQIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDAL 421
                                              .:.:|.|:|: :.|:::..::|.:..:||||
plant   370 ----------------------------------TKTSSAVSLI-LRGANDYMLDEMERALHDAL 399

  Fly   422 NATRAAVEEGIVPGGGTALLRCIE-KLEGVETT-NEDQKLGVEIVRRALRMPCMTIAKNAGVDGA 484
            ...:..:|...|..||.|:...:. .||.:.|| ...::|.:.....||.:....:|.||..|..
plant   400 CIVKRTLESNTVVAGGGAVESALSVYLEHLATTLGSREQLAIAEFADALLIIPKVLAVNAAKDAT 464

  Fly   485 MVVAKV------------ENQAGDYGYDALKGEYGNLIEKGIIDP----TKVVRTAITDASGVAS 533
            .:|||:            :......|.|.:.|...|.:|.|:|:|    .|:::.|         
plant   465 ELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTIRNNLEAGVIEPAMSKVKIIQFA--------- 520

  Fly   534 LLTTAEAVVTEIPKED 549
                .||.:|.:..:|
plant   521 ----TEAAITILRIDD 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 GroEL 24..544 CDD:239460 130/594 (22%)
TCP-1NP_188640.1 TCP1_alpha 12..538 CDD:239451 132/601 (22%)

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