DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and AT3G11830

DIOPT Version :10

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_187789.1 Gene:AT3G11830 / 820356 AraportID:AT3G11830 Length:557 Species:Arabidopsis thaliana


Alignment Length:613 Identity:145/613 - (23%)
Similarity:245/613 - (39%) Gaps:115/613 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SSISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVT 75
            |.:..|:.:.....|...|.......:.....:.|.|..|:||:|.:.:|....||..|:.||.|
plant     3 SMMQPQIILLKEGTDTSQGKAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGAT 67

  Fly    76 VAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEI---- 136
            :.|.:::    .:..||::.|:|.:.:.|.||||||..:||....||....|..|.:...:    
plant    68 IMKLLDI----VHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSY 128

  Fly   137 RRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISAN--GDQAIG-------NLISEAMKKVGRD 192
            |....||:..||: |.......|..|:...:|..:|.  ..:.||       .::.:|:..:|.|
plant   129 RTASTLAIAKVKE-LAVSIEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGND 192

  Fly   193 ---GVITVK--DGKTLTDELEVIEGMKF------------DRGYISP--YFINSSKGAKVEFQDA 238
               .:|.:|  .|..:.|.. :::|:.|            .:.:::|  ..:|.....|.|.::|
plant   193 DRLNLIGIKKVPGGNMRDSF-LVDGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENA 256

  Fly   239 LLLLSEKKISSVQSIIPALELANAQRKPLVIIAEDIDG--EALSTLVVNRLKIGLQVAAVKAPGF 301
            .:.||:.  |..|||:.|         ...||.:.:|.  |:.:.:|::||.||           
plant   257 EIRLSDP--SQYQSIVDA---------EWNIIYDKLDKCVESGAKVVLSRLAIG----------- 299

  Fly   302 GDNRKSTLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQV----GEVVITKDDTLLLKGKGKKDD 362
                     |:|..     :..|.|:.....|...||.:|    |..|.|.              
plant   300 ---------DLATQ-----YFADRDIFCAGRVAEEDLNRVAAAAGGTVQTS-------------- 336

  Fly   363 VLRRANQIKDQIEDTTSEYEKEKLQERLARLASG-----VALLRVGGSSEVEVNEKKDRVHDALN 422
                .|.|.|::..|...:|::::......:.||     .|.:.:.|.::..:.|.:..:|||:.
plant   337 ----VNNIIDEVLGTCEIFEEKQVGGERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIM 397

  Fly   423 ATRAAVEEG-IVPGGGTALLRCIEKL-EGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGVDGAM 485
            ..|.||:.. :|||||...:...:.| :...|.....:|.:....:||.:....:..|||.|...
plant   398 IVRRAVKNSTVVPGGGAIDMEISKYLRQHSRTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATD 462

  Fly   486 VVAKVEN----QAGD---YGYDALKGEYGNLIEKGIIDPTKVVRTAITDASGVASLLTTAEAVVT 543
            |:.|:..    |:|:   ||.|...|...:.....:.:|..|...||..|:..|.|:.:.:..|.
plant   463 VLNKLRQKHAMQSGEGASYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 527

  Fly   544 EIPKEDGAPAMPGMGGMG-GMGGMGGMG 570
            . ||.:.|.. ...|.|| |.||..|.|
plant   528 N-PKSESAQG-DAAGAMGRGRGGGRGRG 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 GroEL 24..544 CDD:239460 132/571 (23%)
AT3G11830NP_187789.1 TCP1_eta 8..531 CDD:239456 134/583 (23%)

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