DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and Hspd1

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_071565.2 Gene:Hspd1 / 63868 RGDID:621314 Length:573 Species:Rattus norvegicus


Alignment Length:577 Identity:429/577 - (74%)
Similarity:500/577 - (86%) Gaps:9/577 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRLPVSLAR-SSISRQLA---MRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIE 61
            |.|||..|.: ..:||.||   .|.|||||:||.:.||:||||||:||||||||||||||.||||
  Rat     1 MLRLPTVLRQMRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIE 65

  Fly    62 QSWGSPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEK 126
            |||||||:|||||||||||:||||::||||||||||||||||||||||||||||||:||||||||
  Rat    66 QSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEK 130

  Fly   127 ISKGANPVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGR 191
            ||||||||||||||||||:.|...||..|:||:||||||||||||||||:.|||:||:|||||||
  Rat   131 ISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKDIGNIISDAMKKVGR 195

  Fly   192 DGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPA 256
            .|||||||||||.||||:|||||||||||||||||:|||.|.|||||.:|||||||||||||:||
  Rat   196 KGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSVQSIVPA 260

  Fly   257 LELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVF 321
            ||:|||.||||||||||:|||||||||:||||:||||.||||||||||||:.|.|||||:||.||
  Rat   261 LEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAVF 325

  Fly   322 GDDADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRANQIKDQIEDTTSEYEKEKL 386
            |::...:.||||:..|||:||||::||||.:||||||.|..:.:|..:|.:|::.||||||||||
  Rat   326 GEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKGKGDKAHIEKRIQEITEQLDITTSEYEKEKL 390

  Fly   387 QERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVE 451
            .||||:|:.|||:|:|||:|:||||||||||.|||||||||||||||.|||.||||||..|:.::
  Rat   391 NERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLK 455

  Fly   452 TTNEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIID 516
            ..|||||:|:||::|||::|.|||||||||:|:::|.|:...:.:.||||:.|::.|::||||||
  Rat   456 PANEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIID 520

  Fly   517 PTKVVRTAITDASGVASLLTTAEAVVTEIPKEDGAPAMPGMGGMGGMGGMGGMGGMM 573
            ||||||||:.||:|||||||||||||||||||:   ..||||.|||||  |||||.|
  Rat   521 PTKVVRTALLDAAGVASLLTTAEAVVTEIPKEE---KDPGMGAMGGMG--GGMGGGM 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 408/539 (76%)
GroEL 24..544 CDD:239460 396/519 (76%)
Hspd1NP_071565.2 GroEL 28..548 CDD:239460 396/519 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341491
Domainoid 1 1.000 760 1.000 Domainoid score I83
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1626
Inparanoid 1 1.050 829 1.000 Inparanoid score I432
OMA 1 1.010 - - QHG61846
OrthoDB 1 1.010 - - D183447at33208
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 1 1.000 - - otm45108
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - LDO PTHR45633
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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