DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and Hsp60B

DIOPT Version :10

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster


Alignment Length:597 Identity:370/597 - (61%)
Similarity:457/597 - (76%) Gaps:27/597 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRLPVSLARSSISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWG 65
            |||..|..|.:| ||..| |.|:||||||..|||||::|||:||||||||||||||:||:|:.|.
  Fly     1 MFRSCVPKAITS-SRCFA-RMYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWT 63

  Fly    66 SPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKG 130
            ||||||||.|||:||.|||:..|:|||||||||:||||.||||||||||||||||||||.:|:.|
  Fly    64 SPKITKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMG 128

  Fly   131 ANPVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVI 195
            ||||||||||||||:.|||.||.||:.|.|.|||.||||:|||||..||.||.||..|||..|.|
  Fly   129 ANPVEIRRGVMLAVDVVKDKLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTI 193

  Fly   196 TVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALELA 260
            ||||||.|.|||.:|:|::||.||:||:|:|||||:||||.:||:::|.|||:.:..|:..||.:
  Fly   194 TVKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQS 258

  Fly   261 NAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDA 325
            ..||:||:||||||.||||:.||:|:|::||||.|||:|.:|.:||..:.|::.|:|..:||||.
  Fly   259 LRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDI 323

  Fly   326 DLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRANQIKDQI-EDTTSEYEKEKLQER 389
            :..|:|:.|:.|||||||.||:||.|:||:||.|...:..|..||:|:: |......::::|::|
  Fly   324 NYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQR 388

  Fly   390 LARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETTN 454
            |:.|..|||:|.:||.||||||||||||.|||||||||:|||||||||||.||||..|:.::|.:
  Fly   389 LSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELKTES 453

  Fly   455 EDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIIDPTK 519
            .|.:.||:||..||||||.|||:||||||.||||||.|.:.||||||:..||..|:|||||||||
  Fly   454 ADLQKGVDIVCNALRMPCQTIAQNAGVDGPMVVAKVLNGSEDYGYDAMGDEYCRLVEKGIIDPTK 518

  Fly   520 VVRTAITDASGVASLLTTAEAVVTEIPKED------GA------------------PAMPGMGGM 560
            |:|||||||:||||||:|.|.|:|:...:|      ||                  .|:.|:|||
  Fly   519 VLRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSGAGGGMDDGLDMNMGGLEELAALSGLGGM 583

  Fly   561 GGMGGMGGMGGM 572
            ||||||||||||
  Fly   584 GGMGGMGGMGGM 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 GroEL 24..544 CDD:239460 338/520 (65%)
Hsp60BNP_524925.1 GroEL 22..543 CDD:239460 338/520 (65%)

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