DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and cct2

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001006757.1 Gene:cct2 / 448434 XenbaseID:XB-GENE-1006535 Length:535 Species:Xenopus tropicalis


Alignment Length:594 Identity:135/594 - (22%)
Similarity:241/594 - (40%) Gaps:121/594 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VSLARSSISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSW--GSPK 68
            :|||..:|.:..|....|:..|....:      |...:.|.|..|:||||.:.|:..|.  .:..
 Frog     4 LSLAPVNIFKAGADEEKAETARLSSFI------GAIAIGDLVKSTLGPKGMDKILLSSGRDSTVT 62

  Fly    69 ITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANP 133
            :|.||.|:.|:|.:    .|..|:::.|::...::|.|||||:.||||..:.:|....:::..:|
 Frog    63 VTNDGATILKAIGI----DNPAAQVLVDMSKVQDDEVGDGTTSVTVLAAELLREAEVLVARKIHP 123

  Fly   134 VEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLIS---EAMKKVGRDGVI 195
            ..|..|...|.:..::.|...|......||..:...::.........|::   :...|:..:.|:
 Frog   124 QTIISGWRQATQVAREALLNASVDHGNDEEKFRCDLLNIARTTLSSKLLTHHKDHFSKLAVEAVL 188

  Fly   196 TVKDGKTLTDELEVIEGMK----------FDRGYISPYFINSSKGAKVEFQDALLLL-------- 242
            .:|.    :..||.|..:|          .|.|::....|..::..::|  :|.:|:        
 Frog   189 RLKG----SGNLEAIHVIKKLGGSLTESYLDEGFLLDKKIGVNQPKRIE--NAKILIANTGMDTD 247

  Fly   243 ------SEKKISSVQSIIPALELANAQR---KPLVIIAEDIDGEALSTLVVN---RLKIGLQVAA 295
                  |..::.|... :..:|||..::   |...|:...|:......|:.|   :|.....|.|
 Frog   248 KIKIFGSRVRVDSTAK-VAEIELAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFATAGVMA 311

  Fly   296 VKAPGFGDNRKSTLTDMAIASGGIVFG--DDADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKG 358
            ::...|....:     :|:.:||.:..  |..:||||...|:     :.||:|.:|..:...|  
 Frog   312 IEHADFAGVER-----LALVTGGEIASTFDHPELVKLGTCKL-----IEEVMIGEDKLIHFSG-- 364

  Fly   359 KKDDVLRRANQIKDQIEDTTSEYEKEKLQERLARLASGVA---LLRVGGSSEVEVNEKKDRVHDA 420
                                              :|.|.|   :||  |:::..::|.:..:|||
 Frog   365 ----------------------------------VAMGEACTIVLR--GATQQILDEAERSLHDA 393

  Fly   421 LNATRAAVEE-GIVPGGGTALLRCIEKL------EGVETTNEDQKLGVEIVRRALRMPCMTIAKN 478
            |......|:: ..|.|||     |.|.|      |....|...:.:.:|...:||||....||.|
 Frog   394 LCVLAQTVKDTRTVYGGG-----CSEMLMAHAVTELAIRTPGKESVAMESFAKALRMLPTIIADN 453

  Fly   479 AGVDGAMVVAKVENQAGD----YGYDALKGEYGNLIEKGIIDPTKVVRTAITDASGVASLLTTAE 539
            ||.|.|.:|:::.....:    ||.|...|..|.:.|.||.:..:|.|..:..||..|.::...:
 Frog   454 AGYDSADLVSQLRAAHSEGKSTYGLDMKNGTIGEMGELGITESFQVKRQVLLSASEAAEVILRVD 518

  Fly   540 AVVTEIPKE 548
            .::...|::
 Frog   519 NIIKAAPRK 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 132/588 (22%)
GroEL 24..544 CDD:239460 128/570 (22%)
cct2NP_001006757.1 TCP1_beta 11..527 CDD:239452 132/585 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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