DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60A and cct5

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_989340.1 Gene:cct5 / 394966 XenbaseID:XB-GENE-980275 Length:541 Species:Xenopus tropicalis


Alignment Length:575 Identity:130/575 - (22%)
Similarity:233/575 - (40%) Gaps:125/575 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RAMMLQGVDVL------ADAVAVT----MGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQ 87
            |...|.|:|.|      |.|||.|    :||.|.:.::....|...:|.||.|:...:::..:. 
 Frog    24 RKSRLSGLDALKSHIMAAKAVANTLRTSLGPNGLDKMMVDKDGQVTVTNDGATILSMMDVDHQI- 87

  Fly    88 NIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETVKDNLK 152
               |||:.:::.:.::|.|||||...|||.|:.::..:.:.:|.:|:.|..|...|.....::|.
 Frog    88 ---AKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYEQAARIAVEHLD 149

  Fly   153 TMSR--PVSTPEEIAQV--ATISANGDQAIGNLISEAMKKVGRDGVITVKD-------------- 199
            .:|.  ||. ||.:..:  ..::..|.:.| |.....|.::..:.::||.|              
 Frog   150 KISDSFPVD-PENLEPLIRTAMTTLGSKVI-NRCHRQMAEIAVNSILTVADMDRKDVDFELIKVE 212

  Fly   200 GKT--LTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLL-------SEKKISSVQSIIP 255
            ||.  ..::.::|:|:..|:.:..|......|.||:    |:|..       ..|....|.|:..
 Frog   213 GKVGGKLEDTQLIKGVIVDKDFSHPQMPKVVKDAKI----AILTCPFEPPKPKTKHKLDVTSVED 273

  Fly   256 ALELANAQRKPLVIIAEDI--------------DGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 306
            ...|...:::..:.:.:.|              |.||      |.|.:..::.||:..|..:   
 Frog   274 YKALQKYEKEKFLEMVKQIKDTGANLAICQWGFDDEA------NHLLLQNELPAVRWVGGPE--- 329

  Fly   307 STLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVI--TKDDTLLLKGKGKKDDVLRRANQ 369
              :..:|||:||.:.   ....:|...|:...|.|.|:..  |||..|:::             |
 Frog   330 --IELIAIATGGRIV---PRFCELTPEKLGYAGIVKEISFGTTKDRMLVIE-------------Q 376

  Fly   370 IKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEG-IV 433
            .|:                      |....:.:.|.:::.:.|.|..:||||...|..|.:. ||
 Frog   377 CKN----------------------SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLVRDNRIV 419

  Fly   434 PGGGTALLRC-IEKLEGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDY 497
            .|||.|.:.| :...|..:.....::..:.....||.:..|::|:|:|::....:.:|.::....
 Frog   420 YGGGAAEISCALAVSEAADKCPSLEQYAMRAFADALEIIPMSLAENSGMNPIQTMTEVRSKQVKE 484

  Fly   498 GYDALKGEYG-NLIEKGIIDPTK--VVRTAITDASGVASLLTTAEAVVTEIPKED 549
            ...||    | :.:.||..|..:  |:.|.|    |....::.|..||..|.|.|
 Frog   485 SNPAL----GIDCLHKGTNDMKQQHVIETLI----GKKQQISLATQVVKMILKID 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 129/573 (23%)
GroEL 24..544 CDD:239460 127/568 (22%)
cct5NP_989340.1 TCP1_epsilon 10..535 CDD:239455 130/575 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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