DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60A and cct4

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_956877.1 Gene:cct4 / 393555 ZFINID:ZDB-GENE-040426-1421 Length:533 Species:Danio rerio


Alignment Length:573 Identity:129/573 - (22%)
Similarity:237/573 - (41%) Gaps:126/573 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQNIGAKLVQ 95
            ::|...:.....:|||:..::||||.:.:|:...|...||.||.|:.|.:::    .:..||::.
Zfish    26 QIRYSNINAGKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQV----LHPAAKMMV 86

  Fly    96 DVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETVKDNLKTMSRP--V 158
            :::...:.|||||||:..|:|.|:.....:.:.||.:|..|......||:...:.|.::|.|  :
Zfish    87 ELSKAQDIEAGDGTTSVVVIAGALLDACAKLLQKGIHPTIISESFQKAVDKGVEVLTSISTPLLL 151

  Fly   159 STPEEIAQVAT-------ISANGDQAIGNLISEAMKKVG---------RDGVITVKDGKTLTDEL 207
            |..|.:...|:       :|.|........:...||.:.         ||..:..|.|.|: |:.
Zfish   152 SDRESLLNSASTSLCSKVVSQNSSLLAPMSVDAVMKVIDPATATSVDLRDINVVKKLGGTI-DDC 215

  Fly   208 EVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSII--PALELANAQRKPLVII 270
            |:::||      :....:.|:..::||         :.||..:|..:  |..::.|.      |:
Zfish   216 ELVDGM------VLTQRVASTGVSRVE---------KAKIGLIQFCLSPPKTDMDNQ------IV 259

  Fly   271 AEDI---------DGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDAD 326
            ..|.         :...:..||....|.|..|..:        :||.|.| |::...:.|.:...
Zfish   260 VSDYAQMDRVLREERAYILNLVKQVKKAGCTVLLI--------QKSILRD-ALSDLALHFLNKMK 315

  Fly   327 LVKLEDVKVSDLGQVGEVVITKD------------------DTLLLKGKGKKDDVLRRANQIKDQ 373
            ::.::|::..::..:.:.:.||.                  :.:.|.|.||...:...|:..|  
Zfish   316 IMVIKDIEREEIEFICKTIGTKPIAHIDQFTPEMLGSAELVEEVSLDGSGKLVKITGCASPGK-- 378

  Fly   374 IEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEE-GIVPGGG 437
               |.|                    :.|.||:::.:.|.:..:||||...|..|:: .::.|||
Zfish   379 ---TVS--------------------IVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGG 420

  Fly   438 T----ALLRCIE---KLEGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAG 495
            .    ..||..|   .|.|:|.      ..|.....||.:...|:|:|||::....|.::.|:..
Zfish   421 APEIELALRLAEYARSLGGMEA------YCVRAYADALEVIPSTLAENAGLNPISTVTELRNRHA 479

  Fly   496 D----YGYDALKGEYGNLIEKGIIDPTKVVRTAITDAS-GVASLLTTAEAVVT 543
            .    .|.:..||...|::|:.::.|..|..:|:|.|: .|.|:|...:.|.|
Zfish   480 QGETTAGINVRKGGISNILEELVVQPLLVSISALTLATETVRSILKIDDLVNT 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 129/573 (23%)
GroEL 24..544 CDD:239460 129/573 (23%)
cct4NP_956877.1 TCP1_delta 20..532 CDD:239454 128/571 (22%)
Cpn60_TCP1 38..533 CDD:278544 128/561 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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