DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and fab1

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster


Alignment Length:499 Identity:99/499 - (19%)
Similarity:167/499 - (33%) Gaps:145/499 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLPVSLARSSISRQLAMR----------GYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRN 57
            :|.|..:.||:::...|:          ||.:: ||.              :.....|:....|.
  Fly   270 KLEVQDSGSSLAKHPQMQRAPLPRKTSVGYQEE-RFS--------------SHPTYTTLSIDDRK 319

  Fly    58 VIIEQSWGSPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKE 122
            .|::||       ...:|:.:.::.....||.|.:|: :..|:.|:.|.:  ..|..:..|:...
  Fly   320 NILQQS-------NSLITLHEEMQRDLPAQNCGQRLI-EFLNSNNKSANE--VQAVAILNAMLAA 374

  Fly   123 GF-EKISKGANPVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAM 186
            || |.|.  .:|.::.....|..:..|.:....||.:|...|               .|..:|..
  Fly   375 GFLEPIV--PDPEQMDFDSSLHYKFSKSSSSDTSRTMSPQFE---------------ANPHAEPQ 422

  Fly   187 KKVGRDGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSK--GAKVEFQDALLLLSEKKISS 249
            .....|.....|: |.|.:|||      .||.|.:.    :||  .:..|.::.||         
  Fly   423 PPKSMDQSAEEKE-KELENELE------NDRCYTTA----TSKLLASYCEHEEQLL--------- 467

  Fly   250 VQSIIPALELANAQRKPLVIIAEDIDGE------ALSTLVVNRLK----------IGLQVAAVKA 298
                        ||    ::.|.::|.|      .|.:...|..|          |...|...|.
  Fly   468 ------------AQ----MLRAHNLDQEWDKVLQMLCSTAANHFKPEHCSNDLMDIRNYVNFKKV 516

  Fly   299 PGFGDNRKSTLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVITK---DDTLLLKGKGKK 360
            || |..:.|.:......|..:...|.|..|....:.:.....|.|.:..|   .:|:||:.|...
  Fly   517 PG-GRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYERIEGKFVTIETVLLQEKEYL 580

  Fly   361 DDVLRRANQIKDQI-----------EDTTSEYE-------KEKLQERLAR---------LASGVA 398
            .:|..|....|..:           :|....||       |..:.|||:|         :.|.:.
  Fly   581 RNVCARIMSFKPNVVLVHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLSRTLQCDIVSSIESNIT 645

  Fly   399 LLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLR 442
            :.::|..::..:.....:       |....|:...|.|.|.|||
  Fly   646 MPKLGYCNDFYIRNYNGK-------TLMFFEKLTNPRGYTCLLR 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 96/490 (20%)
GroEL 24..544 CDD:239460 92/468 (20%)
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489 16/72 (22%)
Fab1_TCP 464..717 CDD:239450 49/252 (19%)
PIPKc 1413..1797 CDD:295374
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453470
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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