DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and CCT8

DIOPT Version :10

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster


Alignment Length:614 Identity:136/614 - (22%)
Similarity:239/614 - (38%) Gaps:151/614 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 AKDVRFGPEVRAMMLQGVDV---LADAV----------AVTM----GPKGRNVIIEQSWGSPKIT 70
            |..|...|.|..|:..|..:   |.:||          |.||    ||.|.|.:|........:|
  Fly     2 ALSVPKAPGVSQMLKDGARMYSGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVT 66

  Fly    71 KDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVE 135
            .|..|:.:.:::    ::..|||:...:...:.|.||||....|||.|:.:...|.:..|....|
  Fly    67 SDAGTIMRELDV----EHPAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAE 127

  Fly   136 IRRGVMLAVETVKDNLKTM-------SRPVSTPEEIAQVATISANGDQA--IGNLISEAMKKVGR 191
            |..|...|:|...:.|..:       .|.|...:|:.:.:.:|....|.  :.:|:|:|...:..
  Fly   128 ISDGYEKALEKALEILPNLVSHKIEDYRNVEKVKEVLRTSIMSKQYGQEDFLNDLVSKACVSILP 192

  Fly   192 D-GVITVKD-------GKTLTDELEVIEGMKFDR---GYIS------------PYFI--NSSKG- 230
            | |...|.:       |..|| :.||:.||.|.|   |.::            |..|  ..:|| 
  Fly   193 DEGTFNVDNIRICKILGSGLT-KSEVVRGMVFKRFVEGDVTYAEKAKIVIFSCPVDIIQTETKGT 256

  Fly   231 AKVEFQDALLLLSEKKISSVQSIIPALELANAQRKPLVIIAEDIDGEALSTLVVNRL-KIGLQVA 294
            ..::..|.||..|..:.|.::|.|.|:..|..:    |::|    |..:..:.::.| |.||.  
  Fly   257 VLIKSADELLSFSSGEESLLESQIKAIADAGVK----VVVA----GGKVGDMALHFLNKYGLM-- 311

  Fly   295 AVKAPGFGDNRKSTLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGK 359
            ||:.....|.|:.:.:..|.....|......:|...:.|.:.:||          ||.::..:  
  Fly   312 AVRLNSKFDLRRLSRSVNATVLPRITTPSQEELGYCDKVCIEELG----------DTTIVAFR-- 364

  Fly   360 KDDVLRRANQIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNAT 424
                    |:.||                      |.:|.:.:.|:::..:::.:..:.||:|..
  Fly   365 --------NEGKD----------------------SRIATVVIRGATDNFMDDIERALDDAINNF 399

  Fly   425 RAAVEEG-IVPGGG-------TALLRCIEKLEGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGV 481
            :....:| .:||.|       |.|....:.|.|::      :..|.....||.:....:|:|:|:
  Fly   400 KCLTRDGRYLPGAGATEIELATQLSAYADTLPGLD------QYAVRKFANALEVFPKALAENSGI 458

  Fly   482 DGAMVVAKV----ENQAG-DYGYDALKGEYGNLIEKGIIDPTKVVRTAITD-----------ASG 530
            :|..:|.::    .|:|| ..|:| ::.|     :...||.||   ..:.|           |.|
  Fly   459 NGTEIVNQLYLAHNNEAGKTIGFD-IEAE-----KASTIDTTK---AKLFDLYQSKFWGLKYAVG 514

  Fly   531 VASLLTTAEAVVTEIPKEDGAPAMPGMGG 559
            .|:.:...:.::  :.|..|.|.:....|
  Fly   515 AAATILKVDQII--MAKRAGGPKVRQAAG 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 GroEL 24..544 CDD:239460 131/596 (22%)
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 126/582 (22%)

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