DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and Hsp60D

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster


Alignment Length:548 Identity:238/548 - (43%)
Similarity:365/548 - (66%) Gaps:8/548 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LARSSISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKD 72
            |:|...|.:..:|.:|.|:|||.|.|.:::|||:|||:|||.|:|||||||:|||...||:||||
  Fly     2 LSRLGRSGRAGVRTFANDIRFGAEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKD 66

  Fly    73 GVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVE-I 136
            |:|||.:::|.::.|::|.:|::...||||.:.||||||||:|||.||.:|...:.:....|: :
  Fly    67 GITVANNVQLGNRRQDMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLL 131

  Fly   137 RRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITVKDGK 201
            |.|::.....|.|.|..||:.|.|..::..||.::.|||:.:..||.:.:.::|..|||.:|:..
  Fly   132 REGILEGSRAVCDALGEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESH 196

  Fly   202 TLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALELANAQRKP 266
            :..||.::.||:....||.||:|...|.  .:|.::.||||:..||..|:.|:||||||..:.:|
  Fly   197 SPFDEAKIQEGITIASGYYSPFFAKQSH--TLELENCLLLLTLAKIDQVEQILPALELARLKERP 259

  Fly   267 LVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDADLVKLE 331
            |:|||::...:.|..||:|.|:..:||.|||||.|||.:...:.|:|.|:||.:..|.:.|.   
  Fly   260 LLIIAKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLLEDASSLA--- 321

  Fly   332 DVKVSDLGQVGEVVITKDDTLLLKG-KGKKDDVLRRANQIKDQIEDTTSEYEKEKLQERLARLAS 395
            |:...|||:|.|.|:...:|.||:. ...::.|..|...|::.|::..::.|.::|:.||.||..
  Fly   322 DLSEEDLGEVMEAVVDAKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQG 386

  Fly   396 GVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETTN-EDQKL 459
            .:|.:.|||:||:||:|:|||.:|||:|.|.|:.:|:|||||||.||||..|:.:..|: .:.::
  Fly   387 HLATIFVGGTSELEVSERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPTDIMELQV 451

  Fly   460 GVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIIDPTKVVRTA 524
            |.|||:.|||:||.|||:|||||...|:.:|...:|:|||||..||:|:|:.:||:|||||:::|
  Fly   452 GREIVKDALRLPCYTIARNAGVDPNEVLRRVLKGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSA 516

  Fly   525 ITDASGVASLLTTAEAVVTEIPKEDGAP 552
            :|.|:|:||||.|.|.::|:.|.:...|
  Fly   517 MTSAAGIASLLATTEVLITKQPTKPKIP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 235/539 (44%)
GroEL 24..544 CDD:239460 230/522 (44%)
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 235/537 (44%)
GroEL 18..536 CDD:239460 230/522 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449860
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S222
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183447at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

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