DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and Hsp60C

DIOPT Version :10

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster


Alignment Length:573 Identity:465/573 - (81%)
Similarity:523/573 - (91%) Gaps:4/573 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRLPVSLARSS-ISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSW 64
            |||...:|.|:: ||..|..|.|||||||||||||||||||||||||||||||||||||||||||
  Fly     4 MFRYTNTLQRTAKISHVLWARNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSW 68

  Fly    65 GSPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISK 129
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||:
  Fly    69 GSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISR 133

  Fly   130 GANPVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGV 194
            ||:|||||||||||:|||||||:.:||||:|||||.||||||||||:::|||||||:||||||||
  Fly   134 GASPVEIRRGVMLAIETVKDNLRRLSRPVNTPEEICQVATISANGDKSVGNLISEAIKKVGRDGV 198

  Fly   195 ITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALEL 259
            |||||||||.||||||||||||||||||||||:||||||||||||||..||||.|..||:|||||
  Fly   199 ITVKDGKTLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALEL 263

  Fly   260 ANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDD 324
            ||||||||||||||::.||||||||||||:||||.||||||||||||..|.|||:|:|||||||:
  Fly   264 ANAQRKPLVIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDE 328

  Fly   325 ADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRANQIKDQIEDTTSEYEKEKLQER 389
            |::|:|||:|:||.|:|||||::||||:||||||:|.:|.:|...:::.|:::||.|||||:|||
  Fly   329 ANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYEKEKMQER 393

  Fly   390 LARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETTN 454
            ||||:||||||||||||:|||:||||||.||||||||||||||||||||||||||:||..::..|
  Fly   394 LARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLKGAN 458

  Fly   455 EDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIIDPTK 519
            |||.:|:||:||||||||:||||||||||||||||||...||||||||||||||:||:|||||||
  Fly   459 EDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGEYGNMIERGIIDPTK 523

  Fly   520 VVRTAITDASGVASLLTTAEAVVTEIPKEDGAP--AMPGMGGMGGMGGMGGMG 570
            ||||||:||:|||||||||||||||:|.|:.|.  |..|:|.:||| ||||||
  Fly   524 VVRTAISDAAGVASLLTTAEAVVTELPLEEAAAAGAAAGLGALGGM-GMGGMG 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 GroEL 24..544 CDD:239460 437/519 (84%)
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 437/519 (84%)

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