DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60A and cct5

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:582 Identity:128/582 - (21%)
Similarity:230/582 - (39%) Gaps:133/582 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LQGVDVL------ADAVAVT----MGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQNIGA 91
            |.|::.|      |.|||.|    :||.|.:.::....|...:|.||.|:...:::..:.    |
Zfish    28 LTGLEALKSHILAAKAVANTLRTSLGPNGLDKMMVDKDGEVTVTNDGATILSMMDVDHQI----A 88

  Fly    92 KLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETVKDNLKTM-- 154
            ||:.:::.:.::|.|||||...|||.|:.::..:.:.:|.:|:.|..|...|.:...:.|..:  
Zfish    89 KLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYDQAAKIAIEQLDKIGD 153

  Fly   155 SRPV--STPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITVKD--------------GKT- 202
            |.||  :..|.:.|.| ::..|.:.| |.....|.::..:.::||.|              ||. 
Zfish   154 SFPVDPNNTESLVQTA-MTTLGSKVI-NRCHRQMAEIAVNAILTVADMERKDVDFELIKVEGKVG 216

  Fly   203 -LTDELEVIEGMKFDRGYISPYFINSSKGAKV---------------------EFQDALLLLSEK 245
             ..::.::|:|:..|:.:..|......|..|:                     ..:|...|...:
Zfish   217 GKLEDTQLIKGVIVDKEFSHPQMPKVLKDTKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYE 281

  Fly   246 KISSVQSIIPALELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLT 310
            | ...|.:|..::...|.   |.|.....|.||      |.|.:..::.|::..|..:     :.
Zfish   282 K-DKFQEMIRQVKENGAN---LAICQWGFDDEA------NHLLLQNELPAIRWVGGPE-----IE 331

  Fly   311 DMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVI--TKDDTLLLKGKGKKDDVLRRANQIKDQ 373
            .:|||:||.:.   ....:|...|:...|.|.|:..  |||..|:                    
Zfish   332 LIAIATGGRIV---PRFCELTPEKLGTAGLVKEICFGTTKDRMLV-------------------- 373

  Fly   374 IEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEG-IVPGGG 437
            ||:..:               |....:.:.|.:::.:.|.|..:||||...|..|.:. ||.|||
Zfish   374 IEECKN---------------SRAVTIFIRGGNKMIIEEAKRALHDALCVIRNLVRDNRIVYGGG 423

  Fly   438 TALLRC-IEKLEGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKV------ENQAG 495
            .:.:.| :...|..:.....::..:.....||.:..|.:|:|:|::....:.:|      ||.:.
Zfish   424 ASEIACALAVNEAADKCPSLEQYAMRAFADALEVIPMALAENSGLNPIQTMTEVRARQVKENNSA 488

  Fly   496 DYGYDALKGEYGNLIEKGIIDPTKVVRTAITDASGVASLLTTAEAVVTEIPKEDG--APAMP 555
             .|.|.|.....::.::.:|:      |.|    |....::.|..||..|.|.|.  .|..|
Zfish   489 -LGIDCLHLSTNDMKQQHVIE------TLI----GKKQQISLATQVVKMILKIDDIRGPGEP 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 125/572 (22%)
GroEL 24..544 CDD:239460 123/567 (22%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 126/576 (22%)
Cpn60_TCP1 44..533 CDD:278544 121/558 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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