DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60A and Cct5

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001004078.1 Gene:Cct5 / 294864 RGDID:735161 Length:541 Species:Rattus norvegicus


Alignment Length:556 Identity:125/556 - (22%)
Similarity:219/556 - (39%) Gaps:148/556 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RAMMLQGVDVL------ADAVAVTM----GPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQ 87
            |...|.|::.|      |.|||.||    ||.|.:.::....|...:|.||.|:...:::..:. 
  Rat    24 RKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI- 87

  Fly    88 NIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLA-------VE 145
               |||:.:::.:.::|.|||||...|||.|:.:|..:.:.:|.:|:.|..|...|       ::
  Rat    88 ---AKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLD 149

  Fly   146 TVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITVKD----------- 199
            .:.||:..   .::.||.:.|.|..:. |.:.: |.....|.::..:.|:||.|           
  Rat   150 KISDNVLV---DINNPEPLIQTAKTTL-GSKVV-NSCHRQMAEIAVNAVLTVADMERRDVDFELI 209

  Fly   200 ---GKT--LTDELEVIEGMKFDRGYISPYFINSSKGAK-----------------------VEFQ 236
               ||.  ..::.::|:|:..|:.:..|........||                       ||..
  Rat   210 KVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKEVLNAKIAILTCPFEPPKPKTKHKLDVTSVEDY 274

  Fly   237 DALLLLSEKKISSVQSIIPALELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGF 301
            .||....::|.   :.:|..::...|.   |.|.....|.||...|:.|.|      .||:..|.
  Rat   275 KALQKYEKEKF---EEMIAQIKETGAN---LAICQWGFDDEANHLLLQNGL------PAVRWVGG 327

  Fly   302 GDNRKSTLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVI--TKDDTLLLKGKGKKDDVL 364
            .:     :..:|||:||.:....::|.   ..|:...|.|.|:..  |||..|:::         
  Rat   328 PE-----IELIAIATGGRIVPRFSELT---SEKLGFAGVVREISFGTTKDKMLVIE--------- 375

  Fly   365 RRANQIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVE 429
                |.|:                      |....:.:.|.:::.:.|.|..:||||...|..:.
  Rat   376 ----QCKN----------------------SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIR 414

  Fly   430 EG-IVPGGGTALLRCIEKLEGVETTNEDQK------LGVEIVRRALRMPCMTIAKNAGVDGAMVV 487
            :. :|.|||.|.:.|     .:..:.|..|      ..:.....||.:..|.:::|:|::....:
  Rat   415 DNRVVYGGGAAEISC-----ALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTM 474

  Fly   488 AKV-------ENQAGDYGYDAL-KG----EYGNLIE 511
            .:|       .|.|  .|.|.| ||    :|.::||
  Rat   475 TEVRARQVKESNPA--LGIDCLHKGSNDMQYQHVIE 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 125/556 (22%)
GroEL 24..544 CDD:239460 125/556 (22%)
Cct5NP_001004078.1 TCP1_epsilon 10..535 CDD:239455 125/556 (22%)
Cpn60_TCP1 44..533 CDD:278544 119/536 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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