DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and cct-3

DIOPT Version :10

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_494218.2 Gene:cct-3 / 173581 WormBaseID:WBGene00018782 Length:543 Species:Caenorhabditis elegans


Alignment Length:595 Identity:135/595 - (22%)
Similarity:236/595 - (39%) Gaps:154/595 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQNIGAKL 93
            |.:|:...:.....:||.:..::||:....::....|...:|.||..:.:.|.:|    :..||.
 Worm    21 GHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVK----HPAAKS 81

  Fly    94 VQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETV---KDNLKTMS 155
            :.::|...:||.|||||:..:||..:.......:.:..:|..|.:....|:|.:   .:|..:.:
 Worm    82 MIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKFSKT 146

  Fly   156 RPVSTPEEIAQVA-------TISANGDQAIGNLISEAMK--KVGRDGV--ITVK--------DGK 201
            ..::...|||:|.       .||...|.|: |:..:|:|  :|.:.||  |.:|        .|.
 Worm   147 VDITDDAEIAKVVKSCLGTKMISKWMDLAV-NISIQAVKTIRVEKAGVREIDIKRYCRIEKIPGG 210

  Fly   202 TLTDELEVIEGM---------KFDRGYISPYFI------NSSKGAKVEFQDALLLLSEKKISSVQ 251
            .:.|. :|::|:         |..|...:|..:      ...||   |.|.:|.::.|:.||   
 Worm   211 RIEDS-QVVKGIVVNKDILHAKMRRRIENPRIVLLDCNLEYKKG---ESQTSLEIMREEDIS--- 268

  Fly   252 SIIPALELANAQR-------KPLVIIAEDIDGEALSTLVVN-RLKIGLQVAAVKAPGFGDNRKST 308
            :|:...|.|..::       ||.::..|    :.:|.|..: .||.|  :..::.....||.:  
 Worm   269 AILEQEEQAIRKQCDEIIKLKPDLVFTE----KGISDLAQHFLLKAG--ITCLRRLKKTDNNR-- 325

  Fly   309 LTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVITKDD-------------TLLLKGKGKK 360
               :|...|..|..|.:|   |.|..|....|:.|||...|:             |::|:|..| 
 Worm   326 ---LARVCGARVVHDTSD---LRDEDVGTKAQLFEVVKIADEYYTYVTAETTTACTVVLRGPSK- 383

  Fly   361 DDVLRRANQIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATR 425
             ||                                              :||.:..:.|:|:..|
 Worm   384 -DV----------------------------------------------INEVERNLQDSLHVVR 401

  Fly   426 -AAVEEGIVPGGGT---ALLRCIE----KLEGVET-TNEDQKLGVEIVRRALRMPC--MTIAKNA 479
             ..:...:|||||.   ||.|.||    |::||:. ..:...|.:|::.|.|...|  .||.|..
 Worm   402 NIMINPKLVPGGGALEMALSREIEQQGAKMDGVKKWPYKAIGLALEVIPRTLIQNCGGSTIRKMT 466

  Fly   480 GVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIIDP----TKVVRTAITDASGVASLLTTAEA 540
            .: .|:.....||..  :|.|...|:..::.:..|.||    .:|::|||.    .:.:|...:.
 Worm   467 EL-RAIHAQNAENWT--FGVDGTSGDLVDMNKLEIWDPLAVRIQVLKTAIE----TSVMLLRIDD 524

  Fly   541 VVTEIPKEDG 550
            :|:...|..|
 Worm   525 IVSGTKKAVG 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 GroEL 24..544 CDD:239460 133/587 (23%)
cct-3NP_494218.2 TCP1_gamma 8..528 CDD:239453 133/587 (23%)

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