DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and hspd1

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001096355.1 Gene:hspd1 / 100124945 XenbaseID:XB-GENE-980059 Length:576 Species:Xenopus tropicalis


Alignment Length:573 Identity:426/573 - (74%)
Similarity:494/573 - (86%) Gaps:14/573 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PVSLARS-SISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPK 68
            |.|.|.| |:|||     |||||:||.:.||:||||||:||||||||||||||.|||||||||||
 Frog    13 PASRALSLSLSRQ-----YAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPK 72

  Fly    69 ITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANP 133
            :|||||||||:|:||||::||||||||||||||||||||||||||||||:|||||||||||||||
 Frog    73 VTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANP 137

  Fly   134 VEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITVK 198
            ||||||||:||:.|...||..|:||:|||||||||||||||||.||.:||:|||:|||.||||||
 Frog   138 VEIRRGVMMAVDAVIKELKNQSKPVTTPEEIAQVATISANGDQEIGKIISDAMKRVGRRGVITVK 202

  Fly   199 DGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALELANAQ 263
            |||||.||||:|||||||||||||||||::||.|.|||||.||||||||||||||:||||:|||.
 Frog   203 DGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQDAYLLLSEKKISSVQSIVPALEIANAH 267

  Fly   264 RKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDADLV 328
            ||||||||||:|||||||||:||||:||||.||||||||||||:.|.||||:|||:|||::...:
 Frog   268 RKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAISSGGVVFGEEGLTL 332

  Fly   329 KLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRANQIKDQIEDTTSEYEKEKLQERLARL 393
            .:||::..|.|:||||::|||||:||||||.|..:.:|..:|.:|:|.|.||||||||.||||:|
 Frog   333 NIEDIQPHDFGKVGEVIVTKDDTMLLKGKGDKAQIEKRIQEIHEQLESTNSEYEKEKLNERLAKL 397

  Fly   394 ASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETTNEDQK 458
            :.|||:::|||:|:||||||||||.|||||||||||||||.|||.||||||..||.:...||||:
 Frog   398 SDGVAVIKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALEALNPANEDQR 462

  Fly   459 LGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIIDPTKVVRT 523
            :|:||:||.|::|.|||||||||:|::||.|:.....:.||||:..|:.||:|||||||||||||
 Frog   463 VGIEIIRRTLKIPAMTIAKNAGVEGSLVVEKIIQSPVEIGYDAMHAEFVNLVEKGIIDPTKVVRT 527

  Fly   524 AITDASGVASLLTTAEAVVTEIPKE--DGAPAMPGMGGMGGMGGM-GGMGGMM 573
            |:.||:|||||||||||||||||||  ||     ||.|||||||| |||||.|
 Frog   528 ALMDAAGVASLLTTAEAVVTEIPKEEKDG-----GMAGMGGMGGMPGGMGGGM 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 404/538 (75%)
GroEL 24..544 CDD:239460 392/519 (76%)
hspd1NP_001096355.1 GroEL 28..548 CDD:239460 392/519 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 749 1.000 Domainoid score I97
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1626
Inparanoid 1 1.050 816 1.000 Inparanoid score I466
OMA 1 1.010 - - QHG61846
OrthoDB 1 1.010 - - D183447at33208
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 1 1.000 - - otm48170
Panther 1 1.100 - - LDO PTHR45633
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R572
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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