DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42249 and cpdB

DIOPT Version :9

Sequence 1:NP_001259438.1 Gene:CG42249 / 32043 FlyBaseID:FBgn0259101 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_418634.1 Gene:cpdB / 948729 ECOCYCID:EG10160 Length:647 Species:Escherichia coli


Alignment Length:588 Identity:116/588 - (19%)
Similarity:212/588 - (36%) Gaps:148/588 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VMCSSAEAADKEGFPVAIIHINDLHARFEATDTSGGTCDEGEECIGGYPRTVYTVKRLLQEQAEL 85
            ::.:|..||..:   :.|:...|||:.....|....|..|.    .|..||...:.....|..  
E. coli    12 LIAASVNAATVD---LRIMETTDLHSNMMDFDYYKDTATEK----FGLVRTASLINDARNEVK-- 67

  Fly    86 NPIYINAGDSFQGT--------LWYNIGRWNVTQQLLNLLPADVMTLGNHEFDHGVEGVVPFLET 142
            |.:.::.||..||:        .....|..:...:.||.|...|.|||||||::|::.:...|..
E. coli    68 NSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLKNALAG 132

  Fly   143 VDTNMLVAN-MDCAHEPTMEGKY--NKSMIIERSGR----KIGVIGVILETT--YDLAN-TGKVI 197
            .....:.|| :|...:..|...|  ..:.::::.|:    |||.|||:....  :|.|| :|||.
E. coli   133 AKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVT 197

  Fly   198 FRNESDTIREEAQLLKAQGANIIIVVSHCGYDVD--QQIAANAGDWIDVIVG------SHSHTFL 254
            ..:.::|:|:....::.:||::::|::|.|...|  :.:|.|:..::..|.|      .|:|...
E. coli   198 VNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVF 262

  Fly   255 -----------------YTGDPP------GPHTPSGDYPTEVIHSSGHRVLIVQASAYARYVGNL 296
                             ..|.|.      |.|.  |....::.:.|| :..:.||.|.||     
E. coli   263 PGKDFADIEGADIAKGTLNGVPAVMPGMWGDHL--GVVDLQLSNDSG-KWQVTQAKAEAR----- 319

  Fly   297 IVYFDDNGDVLDYEGDPLY----MDQSVPEDDIVLQAMVPWQLEMKPIAERTVGQSRVNLQQSQC 357
                            |:|    ......||..:::.:.......:....:.:|:|..|:..   
E. coli   320 ----------------PIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYS--- 365

  Fly   358 SSGECNLGNFFTDAMLHAFVKD-----ASSSSEESWSNVTI----------ALTSTGTFR----- 402
                           ..|.|:|     ..:::::::....|          .|::...|:     
E. coli   366 ---------------YLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRK 415

  Fly   403 ------VPIPAGNITYKQLFAMCPWQNRLVTLSLRGKHIVELLEHVVAPMN---ASSATP----- 453
                  |.:..|.:|::....:..:.|.|:.:...||.:.|.||......|   .:|..|     
E. coli   416 NDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLIN 480

  Fly   454 ----RSSRFLQVSGLRIRYDLNADQR------VFSVRVRCSKCLVPRYIPLDLEHKYRVVVMEYL 508
                |:..|..:.|:..:.|:....|      :.:......|.|.....|:|....:.|....|.
E. coli   481 WDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYR 545

  Fly   509 ANG 511
            |.|
E. coli   546 AYG 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42249NP_001259438.1 UshA 26..547 CDD:223808 115/583 (20%)
MPP_CD73_N 36..316 CDD:277354 76/332 (23%)
5_nucleotid_C 345..514 CDD:280945 35/211 (17%)
cpdBNP_418634.1 cpdB 1..647 CDD:236506 116/588 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0737
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
32.810

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