DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2061 and lancl2

DIOPT Version :9

Sequence 1:NP_001259437.1 Gene:CG2061 / 32042 FlyBaseID:FBgn0027498 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_012820312.1 Gene:lancl2 / 734145 XenbaseID:XB-GENE-5744525 Length:442 Species:Xenopus tropicalis


Alignment Length:452 Identity:155/452 - (34%)
Similarity:228/452 - (50%) Gaps:63/452 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MERRYLKNPFPDF--------AGGENTPFASDEEHIKNL-----------------ICTYVDAIL 40
            ||.|...|||||:        .|.|......|||.:..|                 :.|.:..:|
 Frog    19 MEERAFLNPFPDYRPPQPALGTGAEQENLEEDEEALGELDLPFDREGKIRSSFSRRLQTKISDLL 83

  Fly    41 EHCHPNSDDEDNRG-DLYVGNAGIAFMFWKL-NSCEQTRDLYPALDHAASFIRNAKVNANRYKKR 103
            :.........|... ..|.|..|||.::.:| ...::...|..:||:....:||.          
 Frog    84 QQMEEGLKTADPHDCSAYTGYTGIALLYLQLYRVTKEQSHLQRSLDYVKRILRNL---------- 138

  Fly   104 SAERYSFLCGNAGIYAVSAAISQALK---ETEELSDDLANFKSGIPCSKEFMHTKYGCDEVLVGR 165
            :..|.|||||:||..||||.:...|.   |::|....|...:.|:..:...:.     ||:|.||
 Frog   139 NGRRVSFLCGDAGPLAVSAVVHHKLNNEAESKECIAKLLQLQRGVVSTDTDLP-----DELLYGR 198

  Fly   166 AGYLSGCYWLNDVLPEKKITDDDLVSICQLIVTSGREYSKQNNSP--CPLMYQYHGTEYLGAAHG 228
            ||||....::|:.:....:....:..:...|:.||:..||:.:..  |||:||:|..:|:|||||
 Frog   199 AGYLYALLYVNNEISPDTVPPASIKEVVDAIIESGKNLSKEEHKTERCPLLYQWHKKQYVGAAHG 263

  Fly   229 LCAILHMLLDSPWFRTLPISAPAAE-LRD-IKRSIDFFLELQDSDGNFPVALEDLRSGRDKRLVH 291
            |..|.:||:.       |.|....| |.| :|..||:....:...||:|.:|    |....||||
 Frog   264 LAGIYYMLMQ-------PSSNVDVETLSDLVKPCIDYVRHKKFRSGNYPSSL----SNETDRLVH 317

  Fly   292 WCHGAPGAVYVLAKAYLIFKEEKYLASLRRCADMVWKKGFLRKGPGICHGVAGNGYVFLLLFRLT 356
            |||||||.:::|..|:.:|||:|||.....|::::|::|.||||.|||||.:||||.||.|:..|
 Frog   318 WCHGAPGVIHMLLHAHKVFKEDKYLKDAVECSEVIWQRGLLRKGYGICHGTSGNGYAFLSLYNHT 382

  Fly   357 NEMRYLYRAHKFMELLTNAEF-KLRARTPDRPHSLYEGVAGTVCYLVDLLEPEQAYFPFMDV 417
            .:.:|||||.:|.|..  .|: |...|.||||:||:||:||.:.:|.|:|.||.:.||..::
 Frog   383 QDKKYLYRACRFAEWC--LEYGKHGCRIPDRPYSLFEGMAGAIHFLSDMLTPETSRFPAFEL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2061NP_001259437.1 euk_LANCL 56..413 CDD:271202 136/365 (37%)
lancl2XP_012820312.1 euk_LANCL 101..438 CDD:271202 136/364 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D316897at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8767
SonicParanoid 1 1.000 - - X807
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.