DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vago and CG34215

DIOPT Version :9

Sequence 1:NP_001285106.1 Gene:Vago / 32040 FlyBaseID:FBgn0030262 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001097204.1 Gene:CG34215 / 5740170 FlyBaseID:FBgn0085244 Length:104 Species:Drosophila melanogaster


Alignment Length:105 Identity:31/105 - (29%)
Similarity:41/105 - (39%) Gaps:18/105 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSMIYLVAMMSLIIGGSQAI--------PYRPSAYLYNQQYCMDTLTGRQLYIGEVFTREDQCVR 61
            ||.:.|.|:..|::.|.:|.        |..|..       |:  |.|..|..|:......:|.|
  Fly     3 SSTVLLAAIAVLLVSGYEAAVVRGVFEDPTHPGK-------CV--LEGLVLEKGQSARHPQRCER 58

  Fly    62 IQCLETLQLWEDSCQVPKLTQGNCTPVPSTNPHAEYPRCC 101
            |.|.|.......||....|..|.... ..|||:|:||.||
  Fly    59 IICGENSAAEIQSCGAYGLPPGKKFG-KYTNPNADYPDCC 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VagoNP_001285106.1 SVWC 41..106 CDD:292070 21/61 (34%)
CG34215NP_001097204.1 SVWC 37..99 CDD:292070 22/64 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR39957
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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