DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sev and fer

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:XP_009300152.2 Gene:fer / 565199 ZFINID:ZDB-GENE-060526-234 Length:827 Species:Danio rerio


Alignment Length:684 Identity:161/684 - (23%)
Similarity:259/684 - (37%) Gaps:182/684 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1869 IKPGSGYSLWVQAHATPTKSNSSERLHVRSFAELPELQLLELGPYSLSLTWAG-TPDPLGSLQLE 1932
            |.|.|.|..:::.:.:|.....:.........|...||..|       :.|.. |.|   |||:.
Zfish   255 IDPLSEYDNFIEVYKSPEAKEPNVEFDATLLDETENLQANE-------ILWNNLTAD---SLQVM 309

  Fly  1933 CRSSAEQLRRNVAGNHTKM-----VVEPLQPRTRYQCRLLLGYAATPGAPLYHGTAEVYETL--- 1989
            .:|:.|:|.......|:|.     :.:.::..|:       .|.......|:....:..|.|   
Zfish   310 LKSTTEELLITQQNLHSKEDLMLDLEKKMEESTK-------AYEKKSDVVLFLSQRQFLEELRQT 367

  Fly  1990 ------GDAPSQPGKPQLEHIAEEVFRVTWTAARGNG---APIALYNLEALQARSDIRR------ 2039
                  .:|.....:..||...:|          ..|   .|:..|..:|....|.:..      
Zfish   368 VQLLRCSEAKLMAQRELLEQKMQE----------NEGKEPPPVVNYEEDARSVNSMVMHHLDKSK 422

  Fly  2040 -----------------RRRRRRRNSGGSLEQLPWAEEPVVVEDQWLDFCNTTELSCIVKSLHSS 2087
                             |..:....|....:.:|.:|:| :.|.:|.                  
Zfish   423 DRISKFDTLRHSIAGIIRSPKSVLGSSSFFDVIPTSEKP-LGEQEWY------------------ 468

  Fly  2088 RLLLFRVRARSLEHGWGPYSEESERVAE--PFVSPE---KRGSLVLAIIAPAAIVSSCVLALVLV 2147
                         ||..|.:|..|.:.:  .|:..|   |.|..||::.:..             
Zfish   469 -------------HGAIPRTEAQELLKQQGDFLVRESHGKPGEYVLSVFSDG------------- 507

  Fly  2148 RKVQKRRLRAKKLLQQSR------PSIWSNLSTLQTQQQLMAVRNRAFSTTLSDADIALLPQI-- 2204
               |:|....:....|.|      |:|...:....|.:|::         |.....:.|.|.|  
Zfish   508 ---QRRHFIIQFADNQYRFEGTGFPTIPQLIDHHYTTKQVI---------TKKSGVVLLNPVIKD 560

  Fly  2205 -----NWSQLKLLRFLGSGAFGEVYEGQL--------KTEDSEEPQRVAIKSLRKGASEFAELLQ 2256
                 |...:.|...||.|.||||::|.|        ||...:.||.:.||           .|.
Zfish   561 KKWILNHEDVILGELLGKGNFGEVFKGTLRDKTPVAVKTCKEDLPQDLKIK-----------FLS 614

  Fly  2257 EAQLMSNFKHENIVCLVGICFDTESISLIMEHMEAGDLLSYLRAARATSTQEPQPTAGLSLSELL 2321
            ||:::..:.|.|||.|:|:|...:.|.::||.:..||.||:||..:          ..|...:|:
Zfish   615 EARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKK----------EDLKTKQLV 669

  Fly  2322 AMCIDVANGCSYLEDMHFVHRDLACRNCLVTESTGSTDRRRTVKIGDFGLARDIYKSD-YYRKEG 2385
            ...:|.|.|.:|||..:.:|||||.|||||.|:       ..:||.|||::|.  :.| .|...|
Zfish   670 KFALDAAGGMAYLELKNCIHRDLAARNCLVGEN-------NVLKISDFGMSRQ--EDDGIYSSSG 725

  Fly  2386 EGLLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTLGQQPYAARNNFEVLAHVKEGGRLQQPP 2450
            ...:|::|.:||:|..|.::::||||::|:|.||..:||..||....|.:....|::|.|:..|.
Zfish   726 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGMCPYPGMTNQQAREQVEKGYRMSCPQ 790

  Fly  2451 MCTEKLYSLLLLCWRTDPWERPSFRRCYNTLHAI 2484
            .|.:::|.::..||...|..||.|......|.|:
Zfish   791 KCPDEVYRVMQRCWEYKPENRPKFADIQKELAAV 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996 5/21 (24%)
FN3 1993..2111 CDD:238020 19/143 (13%)
PTKc_c-ros 2213..2483 CDD:270640 94/278 (34%)
ferXP_009300152.2 None
Blue background indicates that the domain is not in the aligned region.

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