DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sev and alk

DIOPT Version :9

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:XP_691964.7 Gene:alk / 563509 ZFINID:ZDB-GENE-031027-1 Length:1705 Species:Danio rerio


Alignment Length:428 Identity:163/428 - (38%)
Similarity:236/428 - (55%) Gaps:47/428 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  2114 AEPFVSPEKRGSLVLAI-IAPAAIVSSCVLALVLVRKVQKRR---LRAKKLLQQSRPSIWSNL-- 2172
            |:|.:|     .|.|.: :..:|::::.:||:..|..:.:|:   |::.:|..||.....|.|  
Zfish  1023 AQPSLS-----HLALGLSVGTSALIAALLLAVSGVMIMYRRKHTELQSIQLELQSPDCKLSKLRA 1082

  Fly  2173 STLQTQQQLMAVRNRAF-STTLSDADIALLPQINWSQLKLLRFLGSGAFGEVYEG-QLKTEDSEE 2235
            ||:.|...    .|..| ..|.|..|:..:|:.|   :.|.|.||.||||||||| .:.......
Zfish  1083 STIMTDYN----PNYCFGGKTASVNDLKEVPRRN---ISLTRGLGHGAFGEVYEGLAVGIPGEPS 1140

  Fly  2236 PQRVAIKSLRKGASEFAEL--LQEAQLMSNFKHENIVCLVGICFDTESISLIMEHMEAGDLLSYL 2298
            |.:||:|:|.:..||..||  |.||.::|.|.|:|||..:|:........:::|.|..|||.|:|
Zfish  1141 PMQVAVKTLPEVCSEQDELDFLMEALIISKFSHQNIVRCIGVSLQALPHFILLELMAGGDLKSFL 1205

  Fly  2299 RAARATSTQEPQPTAGLSLSELLAMCIDVANGCSYLEDMHFVHRDLACRNCLVT-ESTGSTDRRR 2362
            |..| ...:.|   :.|::.:||.:..|:|.||.|||:..|:|||:|.||||:| :..|     |
Zfish  1206 RETR-PRLEHP---SSLTMVDLLNIARDIARGCQYLEENQFIHRDIAARNCLLTCKGPG-----R 1261

  Fly  2363 TVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTLGQQP 2427
            ..||||||:|||||::.||||.|..:|||:||.||:.::|:||:::|.|:||||.|||.:||..|
Zfish  1262 VAKIGDFGMARDIYRASYYRKGGRAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 1326

  Fly  2428 YAARNNFEVLAHVKEGGRLQQPPMCTEKLYSLLLLCWRTDPWERPSFRRCYNTLHAISTDLRRTQ 2492
            |.:|:|.|||..|..|||:..|..|...:|.::...|:..|.:||:|          ||.|.|..
Zfish  1327 YPSRSNQEVLEFVTNGGRMDPPKNCPGPVYRIMTQSWQHQPEDRPNF----------STILERID 1381

  Fly  2493 MASATADTVVSCSRPEFKVRFDGQPLEEHREHNERPED 2530
            ......| ||:...|   |.:...|.||.|. ..||||
Zfish  1382 YCLQDPD-VVNVPLP---VEYGPIPEEEERV-PMRPED 1414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:278470
FN3 826..921 CDD:238020
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
FN3 1799..1897 CDD:238020
FN3 1993..2111 CDD:238020
Pkinase_Tyr 2209..2481 CDD:285015 120/275 (44%)
PTKc_c-ros 2213..2483 CDD:270640 119/273 (44%)
alkXP_691964.7 LDLa 449..475 CDD:197566
MAM 488..639 CDD:99706
FXa_inhibition 980..1012 CDD:317114
PTKc_ALK_LTK 1106..1382 CDD:270632 126/297 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D27151at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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