DRSC/TRiP Functional Genomics Resources

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Protein Alignment sev and Ret

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster


Alignment Length:427 Identity:136/427 - (31%)
Similarity:209/427 - (48%) Gaps:96/427 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  2105 PYSEESERVAEPFVSPEKRGS---------LVLAIIAPAA---------IVSSCVLALVLV---- 2147
            |...::|..|||.:. .:||:         ::|.::..|.         .|.:|.|..||:    
  Fly   650 PRKRKNETEAEPLLG-VRRGTPPNQPLQDPMLLGVLNVAGFECDRSCMFFVITCPLLFVLLLLCL 713

  Fly  2148 ----RKVQKRRLRAKKLLQQSRPSIWSNLSTLQTQQQLMAVRNRAFSTTLSDADIALLP------ 2202
                ||:.:|||..:.:...|:.::..:                      ...|.||:|      
  Fly   714 LIAQRKMLQRRLGKQSMTTSSKQALPES----------------------GGGDFALMPLQSGFR 756

  Fly  2203 ----QINW----SQLKLLRFLGSGAFGEVYEGQLKTEDSEEP--QRVAIKSLRKGAS--EFAELL 2255
                ...|    .:|:|...||.|.||:|.:| ..||.:..|  ..||:|.|:||::  |:..||
  Fly   757 FESGDAKWEFPREKLQLDTVLGEGEFGQVLKG-FATEIAGLPGITTVAVKMLKKGSNSVEYMALL 820

  Fly  2256 QEAQLMSNFKHENIVCLVGICFDTESISLIMEHMEAGDLLSYLRAARATSTQEPQPTAGLSLSE- 2319
            .|.||:....|.|::.|:|.|..:|:..||:|:...|.|.||||.:|...      .||:..:: 
  Fly   821 SEFQLLQEVSHPNVIKLLGACTSSEAPLLIIEYARYGSLRSYLRLSRKIE------CAGVDFADG 879

  Fly  2320 --------LLAMCIDVANGCSYLEDMHFVHRDLACRNCLVTESTGSTDRRRTVKIGDFGLARDIY 2376
                    :|.....:..|.:||.::..||||||.||.|:.:.       :..||.||||.||:|
  Fly   880 VEPVNVKMVLTFAWQICKGMAYLSELKLVHRDLAARNVLLADG-------KICKISDFGLTRDVY 937

  Fly  2377 KSDYYRKEGEGLLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTLGQQPY---AARNNFEVLA 2438
            :.|.|.|.....:||:||:||||.|.::|::||||:|||||||::|||..||   |.:|.:.:| 
  Fly   938 EDDAYLKRSRDRVPVKWMAPESLADHVYTSKSDVWSFGVLCWELITLGASPYPGIAPQNLWSLL- 1001

  Fly  2439 HVKEGGRLQQPPMCTEKLYSLLLLCWRTDPWERPSFR 2475
              |.|.|:.:|..|:|.:||::..||..:|..||||:
  Fly  1002 --KTGYRMDRPENCSEAVYSIVRTCWADEPNGRPSFK 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996
FN3 1993..2111 CDD:238020 1/5 (20%)
PTKc_c-ros 2213..2483 CDD:270640 109/279 (39%)
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 111/284 (39%)
Blue background indicates that the domain is not in the aligned region.

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