DRSC/TRiP Functional Genomics Resources

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Protein Alignment sev and Abl1

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:NP_001094320.1 Gene:Abl1 / 311860 RGDID:1584969 Length:1143 Species:Rattus norvegicus


Alignment Length:454 Identity:138/454 - (30%)
Similarity:203/454 - (44%) Gaps:89/454 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  2098 SLE-HGW--GPYSEESERVAEPFVSPEKRGSLVLAIIAPAAIVSSCVLALVLVRKVQKR-RLRAK 2158
            ||| |.|  ||.|..:   ||..:|....||.                   |||:.:.. ..|:.
  Rat   140 SLEKHSWYHGPVSRNA---AEYLLSSGINGSF-------------------LVRESESSPGQRSI 182

  Fly  2159 KLLQQSRPSIWSNLSTLQTQQQLMAVRNRAFST---------TLSDADIALL----PQIN----- 2205
            .|..:.|  ::.......:..:|.......|:|         |::|..|..|    |:.|     
  Rat   183 SLRYEGR--VYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTIY 245

  Fly  2206 --------W----SQLKLLRFLGSGAFGEVYEGQLKTEDSEEPQRVAIKSLRKGASEFAELLQEA 2258
                    |    :.:.:...||.|.:||||||..|    :....||:|:|::...|..|.|:||
  Rat   246 GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK----KYSLTVAVKTLKEDTMEVEEFLKEA 306

  Fly  2259 QLMSNFKHENIVCLVGICFDTESISLIMEHMEAGDLLSYLRAARATSTQEPQPTAGLSLSELLAM 2323
            .:|...||.|:|.|:|:|.......:|.|.|..|:||.|||..   :.||      :|...||.|
  Rat   307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQE------VSAVVLLYM 362

  Fly  2324 CIDVANGCSYLEDMHFVHRDLACRNCLVTESTGSTDRRRTVKIGDFGLARDIYKSDYYRKEGEGL 2388
            ...:::...|||..:|:|||||.|||||.|:       ..||:.||||:| :...|.|.......
  Rat   363 ATQISSAMEYLEKKNFIHRDLAARNCLVGEN-------HLVKVADFGLSR-LMTGDTYTAHAGAK 419

  Fly  2389 LPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTLGQQPYAARNNFEVLAHVKEGGRLQQPPMCT 2453
            .|::|.:||||....|:.:|||||||||.|||.|.|..||...:..:|...:::..|:::|..|.
  Rat   420 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 484

  Fly  2454 EKLYSLLLLCWRTDPWERPSFRRCYNTLHA----------ISTDLRRTQMASATADTVVSCSRP 2507
            ||:|.|:..||:.:|.:||||...:.....          :..:|.:..|..|...|:.:...|
  Rat   485 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRGMRGAAGSTLQAPELP 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996
FN3 1993..2111 CDD:238020 8/15 (53%)
PTKc_c-ros 2213..2483 CDD:270640 104/269 (39%)
Abl1NP_001094320.1 SH3_Abl 84..137 CDD:212784
SH2_ABL 142..235 CDD:198189 24/116 (21%)
PTKc_Abl 254..516 CDD:270645 105/282 (37%)
FABD 1019..1143 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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