DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sev and fgfr1a

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:NP_694494.2 Gene:fgfr1a / 30705 ZFINID:ZDB-GENE-980526-255 Length:810 Species:Danio rerio


Alignment Length:867 Identity:220/867 - (25%)
Similarity:342/867 - (39%) Gaps:246/867 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1784 TLVLAPLELLTA----------SATPSPPRNFSVRVLSPRELEVSWLPPEQLRSESVYYTLHWQQ 1838
            ||:|..:.|..|          ...|:.|.::::.  |..:||:|....|..:.      :.|.:
Zfish    10 TLLLISVLLTQALQSQGRPAIQDEAPAEPTSYTLD--SGEKLELSCKAKEDTQK------VTWTK 66

  Fly  1839 EL----DGENVQDRREWEAHERRLETAGTHRLTGIKP-GSG-YSLWVQAHATPTKSNSSERLHV- 1896
            :|    |||:.:.|.:....|:            ::| .|| |:.:.|.    ..||.:|..:: 
Zfish    67 DLVPLVDGEHTRLRNDQMEIEK------------VEPTDSGLYACFAQG----LNSNHTEYFNIS 115

  Fly  1897 -----------RSFAELPELQLLELGPYSLSLTWA-------------------------GTPDP 1925
                       ...|:|...|.|.:.|     .||                         |.|.|
Zfish   116 VTDEEDEVDSSSEEAKLSNDQNLPMAP-----VWAQPDKMEKKLHAVPASKTVKFRCQANGNPTP 175

  Fly  1926 LGSLQLECRSSAEQLRRN--VAGNHTK-----MVVEPLQP--RTRYQCRLLLGYAA--------- 1972
                .|:...:.::.:|:  :.|...:     :::|.:.|  |..|.|.:...:.:         
Zfish   176 ----TLKWLKNGKEFKRDQRIGGFKVREHMWTIIMESVVPSDRGNYTCLVENRHGSINHTYQLDV 236

  Fly  1973 ---TPGAPLYHG------TAEV-----YETLGDAPSQPGKPQLEHIAEEV------------FRV 2011
               :|..|:...      ||.|     :|....:..||....|:||  ||            .|.
Zfish   237 VERSPHRPILQAGLPANRTAVVGSDVEFECKVFSDPQPHIQWLKHI--EVNGSRYGPDGLPYVRA 299

  Fly  2012 TWTAARGNGAPIALYNLEALQARSDIRRRRRRRRRNSGGSLEQLPWAEEPVVVEDQWLDFCNTTE 2076
            ..||    |.......:|.||.|:                          |.:||       ..|
Zfish   300 LKTA----GVNTTDKEMEVLQIRN--------------------------VSLED-------AGE 327

  Fly  2077 LSCIV-----KSLHSSRLLLFRVRARSLEHGWGPYSEESERVAEPFVSPEKRGSLVLAIIAPAAI 2136
            .:|:.     .|.||:.|.::                   :...|...|.:....||.......:
Zfish   328 YTCLAGNSIGHSHHSAWLTVY-------------------KAVPPTQLPNQTYLEVLIYCVGFFL 373

  Fly  2137 VSSCVLALVLVRKVQKRRLRAKKLLQQSRPSIWSNLSTLQTQQQL--------------MAVRNR 2187
            :  ||:....|  :.|....|||....|:.::.....::..::|:              |.||..
Zfish   374 I--CVMVGTAV--LAKMHSSAKKSDFNSQLAVHKLAKSIPLRRQVTVSVDSSSSMHSGGMLVRPS 434

  Fly  2188 AFSTT----LSDADIALLPQ-----INWSQLKLLRFLGSGAFGEVYEGQLKTEDSEEPQR---VA 2240
            ..|::    ||......|||     :...:|.|.:.||.|.||:|...:....|.|:|.|   ||
Zfish   435 RLSSSGSPMLSGVSEYELPQDPRWEVQRDRLVLGKPLGEGCFGQVMMAEAMGMDKEKPNRITKVA 499

  Fly  2241 IKSLRKGASE--FAELLQEAQLMSNF-KHENIVCLVGICFDTESISLIMEHMEAGDLLSYLRAAR 2302
            :|.|:..|:|  .::|:.|.::|... ||:||:.|:|.|.....:.:|:|....|:|..|||..|
Zfish   500 VKMLKSDATEKDLSDLISEMEMMKIIGKHKNIINLLGACTQDGPLYVIVEFAAKGNLREYLRVRR 564

  Fly  2303 ATSTQ-----EPQPTAGLSLSELLAMCIDVANGCSYLEDMHFVHRDLACRNCLVTESTGSTDRRR 2362
            ....:     :..|...:|:.:|::....||.|..||.....:|||||.||.||||.       .
Zfish   565 PPGMEYCYNPDQVPVENMSIKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-------N 622

  Fly  2363 TVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTLGQQP 2427
            .:||.||||||||:..|||:|...|.|||:||:||:|.|.::|.|||||:||||.|||.|||..|
Zfish   623 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 687

  Fly  2428 YAARNNFEVLAHVKEGGRLQQPPMCTEKLYSLLLLCWRTDPWERPSFRRCYNTLHAISTDLRRT- 2491
            |......|:...:|||.|:.:|..||.:||.::..||...|.:||:|::       :..||.|| 
Zfish   688 YPGVPVEELFKLLKEGHRMDRPSTCTHELYMMMRDCWHAVPSQRPTFKQ-------LVEDLDRTL 745

  Fly  2492 QMASATADTVVSCSRPEFKVRF 2513
            .|.|......:|.|..:|...|
Zfish   746 SMTSNQEYLDLSVSLDQFSPNF 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996 20/96 (21%)
FN3 1993..2111 CDD:238020 24/134 (18%)
PTKc_c-ros 2213..2483 CDD:270640 111/280 (40%)
fgfr1aNP_694494.2 Ig 28..116 CDD:472250 22/111 (20%)
Ig strand B 49..53 CDD:409353 2/3 (67%)
Ig strand C 61..65 CDD:409353 0/9 (0%)
Ig strand E 82..86 CDD:409353 0/3 (0%)
Ig strand F 96..101 CDD:409353 1/4 (25%)
Ig strand G 109..112 CDD:409353 1/2 (50%)
Ig 142..236 CDD:472250 14/102 (14%)
Ig strand B 163..167 CDD:409353 0/3 (0%)
Ig strand C 176..180 CDD:409353 1/3 (33%)
Ig strand E 202..206 CDD:409353 0/3 (0%)
Ig strand F 216..221 CDD:409353 2/4 (50%)
Ig strand G 229..232 CDD:409353 0/2 (0%)
Ig 244..347 CDD:472250 29/141 (21%)
Ig strand B 262..266 CDD:409353 0/3 (0%)
Ig strand C 275..279 CDD:409353 0/3 (0%)
Ig strand E 313..317 CDD:409353 2/3 (67%)
Ig strand F 327..332 CDD:409353 2/4 (50%)
Ig strand G 340..343 CDD:409353 1/2 (50%)
PTKc_FGFR1 451..752 CDD:270678 122/314 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 787..810
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.