DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sev and Fer

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:NP_001382687.1 Gene:Fer / 301737 RGDID:1306273 Length:823 Species:Rattus norvegicus


Alignment Length:670 Identity:170/670 - (25%)
Similarity:275/670 - (41%) Gaps:159/670 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1869 IKPGSGYSLWVQAHATPTKSNSSERLHVRSFAELPELQLLELGPYSLSLTWAG-TPDPLGSLQLE 1932
            |.|.:.|:.::..|.|................|...||..|       :.|.. |.|   |||:.
  Rat   254 IDPSTEYNDFIDVHRTTAAKEQEIEFDTSLLEENENLQANE-------IMWNNLTAD---SLQVM 308

  Fly  1933 CRSSAEQLRRNVAG-NHTKMVVEPLQPRTRYQCR---------LLLGYAATPGAPLYHGTAEVYE 1987
            .::.||:|.:.... .|.:..|..|:.|......         ||||.                 
  Rat   309 LKTLAEELTQTQQMLLHKEAAVLELEKRIEESSETCAKKSDIVLLLGQ----------------- 356

  Fly  1988 TLGDAPSQPGKPQLEHIAEEVFRVTWTAAR--------------GNG---APIALYNLEALQARS 2035
                      |..||.:.:.|.::..|.|:              .:|   .|:..|..:|....|
  Rat   357 ----------KQALEELKQSVQQLRCTEAKCAAQKELLEQKVQENDGKEPPPVVNYEEDARSVTS 411

  Fly  2036 DIRRRRRRRRRNSGGSLEQLPWAEEPVVVEDQWLDFCNTTELSCIVKSLHSSRLLLFRVRARSL- 2099
            ..|:.|..:..:...|:..:..:.:.|:        .::|:||.::.           |..:.| 
  Rat   412 MERKERLSKFESIRHSIAGIIKSPKSVL--------GSSTQLSDVIS-----------VGEKPLA 457

  Fly  2100 EHGWG----PYSEESERVAE--PFVSPE---KRGSLVLAIIAPAAIVSSCVLALVLVRKVQKRR- 2154
            ||.|.    |..|..|.:.:  .|:..|   |.|..||::.:..                |:|. 
  Rat   458 EHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVYSDG----------------QRRHF 506

  Fly  2155 -LRAKKLLQQSRPSIWSNLSTL-----QTQQQLMAVRNRAFSTTLSDADIALLP-------QINW 2206
             ::....|.:...:.:||:..|     .|:|.:          |.....:.|.|       .:|.
  Rat   507 IIQFVDNLYRFEGTGFSNIPQLIDHHFNTKQVI----------TKKSGVVLLNPIPKDKKWVLNH 561

  Fly  2207 SQLKLLRFLGSGAFGEVYEGQLKTEDSEEPQRVAIKSLRKGASEFAEL--LQEAQLMSNFKHENI 2269
            ..:.|...||.|.|||||:|.||     :...||:|:.::...:..::  ||||:::..:.|.||
  Rat   562 EDVSLGELLGKGNFGEVYKGTLK-----DKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNI 621

  Fly  2270 VCLVGICFDTESISLIMEHMEAGDLLSYLRAARATSTQEPQPTAGLSLSELLAMCIDVANGCSYL 2334
            |.|:|:|...:.:.:|||.:..||.||:||..:..          |.|.:|:...:|||.|..||
  Rat   622 VKLIGVCTQRQPVYIIMELVPGGDFLSFLRKRKDE----------LKLKQLVRFSLDVAAGMLYL 676

  Fly  2335 EDMHFVHRDLACRNCLVTESTGSTDRRRTVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMSPESL 2399
            |..:.:|||||.|||||.|:       .|:||.|||::|. .....|...|...:|::|.:||:|
  Rat   677 EGKNCIHRDLAARNCLVGEN-------NTLKISDFGMSRQ-EDGGVYSSSGLKQIPIKWTAPEAL 733

  Fly  2400 VDGLFTTQSDVWAFGVLCWEILTLGQQPYAARNNFEVLAHVKEGGRLQQPPMCTEKLYSLLLLCW 2464
            ..|.::::||||:||:|.||..:||..||....|.:....|:.|.|:..|..|.|:::::::.||
  Rat   734 NYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEEIFTIMMKCW 798

  Fly  2465 RTDPWERPSFRRCYNTLHAI 2484
            ...|..||.|...:..|.||
  Rat   799 DYKPENRPKFSDLHKELTAI 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996 5/21 (24%)
FN3 1993..2111 CDD:238020 25/139 (18%)
PTKc_c-ros 2213..2483 CDD:270640 97/271 (36%)
FerNP_001382687.1 Important for interaction with membranes containing phosphoinositides. /evidence=ECO:0000250 1..300 10/52 (19%)
F-BAR_Fer 5..238 CDD:153370
SH2_Fps_family 454..539 CDD:198224 21/100 (21%)
Protein Kinases, catalytic domain 567..817 CDD:473864 97/272 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.