DRSC/TRiP Functional Genomics Resources

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Protein Alignment sev and csk-1

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:NP_001293162.1 Gene:csk-1 / 266817 WormBaseID:WBGene00000812 Length:624 Species:Caenorhabditis elegans


Alignment Length:548 Identity:134/548 - (24%)
Similarity:210/548 - (38%) Gaps:154/548 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1964 CRLLLGYAATPGA-PLYHGTAEVYETLGDAPSQP----------------GKPQLEHIAEEV--F 2009
            |.:..|.|:|..: ..:|.||        |..||                |||....:..|.  |
 Worm   210 CDVAPGAASTTSSTSSHHSTA--------ANHQPWFHSMISRENTEKLLRGKPDGTFLVRESTNF 266

  Fly  2010 RVTWTAARGNGAPIALYNLEALQARSDIRRRRRRRRRNSGGSLEQLPWAEEPVVVEDQWLDFCNT 2074
            ...:|........:..|.:|                :.|||   ||...:|..        |.|.
 Worm   267 PGDFTLCMSFHGKVEHYRIE----------------QTSGG---QLTCDKEEY--------FSNL 304

  Fly  2075 TELSCIVKSLHSSRLLLFRVRARSLEHGWGPYSEESERVAEPFVSPEKRGSLVLAIIAPAAIVSS 2139
            |:|                     :.|    |..:::.:....|:|         ||...|..||
 Worm   305 TQL---------------------VSH----YKRDADGLCHRLVTP---------IICETATFSS 335

  Fly  2140 CVLALVLVRKVQKRRLRAKKLLQQSRPSIWSNLSTLQTQQQLMAVRNRAFSTTLSDADIALLPQI 2204
                                    :..|.:.:.||:..:.:....|:.....:.:|.|:.     
 Worm   336 ------------------------NGSSSFGSSSTVDLEDRTSVFRHAGLVISSNDIDVG----- 371

  Fly  2205 NWSQLKLLRFLGSGAFGEVYEGQLKTEDSEEPQRVAIK-SLRKGASEFAELLQEAQLMSNFKHEN 2268
                    ..:|.|.||:|..|..|.      ::||:| |.|.|......||.||:.|....|.|
 Worm   372 --------DTIGHGEFGDVRLGTYKN------RKVALKVSKRHGNGMLDSLLDEAKFMVGLSHPN 422

  Fly  2269 IVCLVGICFDTESISLIMEHMEAGDLLSYLRAARATSTQEPQPTAGLSLSELLAMCIDVANGCSY 2333
            :|.|||:..|..::.:|.|:|..|:|:..||:         :....|...:|:...:|:..|..|
 Worm   423 LVTLVGVVLDDVNVYMITEYMANGNLIDLLRS---------RGRHALERRQLMMFAMDICQGMCY 478

  Fly  2334 LEDMHFVHRDLACRNCLVTESTGSTDRRRTVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMSPES 2398
            ||....||||||.||.|:       |.....|:.|||||:......:  ....|..|::|.:||:
 Worm   479 LESKQIVHRDLAARNVLL-------DDDLVAKVSDFGLAKKANSQSH--DSASGKFPIKWTAPEA 534

  Fly  2399 LVDGLFTTQSDVWAFGVLCWEILTLGQQPYAARNNFEVLAHVKEGGRLQQPPMCTEKLYSLLLLC 2463
            |....|||:||||:||:|.|||.:.|:.||......:|:.::::|.|::.|..|..:::.::...
 Worm   535 LRHSQFTTKSDVWSFGILLWEIFSFGRVPYPRIPIQDVVRYIEKGYRMEAPEGCPPEIFKVMNET 599

  Fly  2464 WRTDPWERPSFRRCYNTLHAISTDLRRT 2491
            |.....:||||.:....|    |.:|.|
 Worm   600 WALSAQDRPSFGQVLQRL----TTIRNT 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996
FN3 1993..2111 CDD:238020 22/135 (16%)
PTKc_c-ros 2213..2483 CDD:270640 88/270 (33%)
csk-1NP_001293162.1 SH2_csk_like 232..330 CDD:198190 26/158 (16%)
PTKc_Csk_like 362..620 CDD:270635 91/298 (31%)
Blue background indicates that the domain is not in the aligned region.

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