DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sev and C18H7.4

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:NP_499953.2 Gene:C18H7.4 / 182803 WormBaseID:WBGene00015994 Length:390 Species:Caenorhabditis elegans


Alignment Length:347 Identity:99/347 - (28%)
Similarity:161/347 - (46%) Gaps:41/347 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  2147 VRKVQ-KRRLRAKKLLQQSRPSIWSNLSTLQTQQQLMAVRNRAFSTTLSDADIALLPQINWSQLK 2210
            :|:.: ||...:.||..:|..:|...:.:|:.:    .:..:.....|..|......|:..:.:.
 Worm    63 IRRYEIKRNQNSAKLGNRSASNIGKLIDSLKAE----TIEIKGEKVILKRAIAKGKFQLMHTDVN 123

  Fly  2211 LLRFLGSGAFGEVYEGQL-KTEDSEEPQRVAIKSL-RKGASE--FAELLQEAQLMSNFKHENIVC 2271
            ..:.:||||:|.||.|:| ||.     ..||:|.| .:|..|  ..::::||::|..:.|.|||.
 Worm   124 FKKQIGSGAYGTVYRGRLVKTN-----AIVAVKKLDTEGTDEEGLTDMMKEARVMQLYDHPNIVK 183

  Fly  2272 LVGICFDTESISLIMEHMEAGDLLSYLRAARATSTQEPQPTAGLSLSELLAMCIDVANGCSYLED 2336
            ..|...|.....|::|....|.:...||       .:|:    :.::..:......|.|..||..
 Worm   184 FYGYILDDVPYLLVLEFCNGGSVEDLLR-------DKPE----IKINRRVQYTYMAACGMDYLHK 237

  Fly  2337 MHFVHRDLACRNCLVTESTGSTDRRRTVKIGDFGLAR--DIYKSDYYRKEGEGLLPVRWMSPESL 2399
            .:.:|||:|.||||:        ....||:.|||:.|  .:||.|..:.     |.|||::||..
 Worm   238 KNCIHRDIASRNCLI--------HNGVVKMADFGMCRATAVYKVDLSKP-----LNVRWLAPEVW 289

  Fly  2400 VDGLFTTQSDVWAFGVLCWE-ILTLGQQPYAARNNFEVLAHVKEGGRLQQPPMCTEKLYSLLLLC 2463
            .:|.....:||:||||:.|| .:|..|.||.....:.|...|:.|.|:|.|....:.:.|||..|
 Worm   290 TNGETRYNTDVYAFGVMIWEFFITPYQSPYTEWKGYTVKQKVRGGYRMQPPEGMPKDVASLLAEC 354

  Fly  2464 WRTDPWERPSFRRCYNTLHAIS 2485
            |..||.:||:..:....|..::
 Worm   355 WNHDPEKRPNAEKLKEKLEDLN 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996
FN3 1993..2111 CDD:238020
PTKc_c-ros 2213..2483 CDD:270640 88/276 (32%)
C18H7.4NP_499953.2 SH2_Fps_family 11..99 CDD:198224 8/39 (21%)
PK_Tyr_Ser-Thr 122..372 CDD:462242 87/278 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.