DRSC/TRiP Functional Genomics Resources

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Protein Alignment sev and scd-2

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:NP_504685.3 Gene:scd-2 / 179054 WormBaseID:WBGene00004740 Length:1421 Species:Caenorhabditis elegans


Alignment Length:12 Identity:6/12 - (50%)
Similarity:7/12 - (58%) Gaps:0/12 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 NTFFSLEMLAFK 171
            ||.||.:..|.|
 Worm   329 NTAFSFDFSAIK 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996
FN3 1993..2111 CDD:238020
PTKc_c-ros 2213..2483 CDD:270640
scd-2NP_504685.3 LDLa 305..338 CDD:238060 4/8 (50%)
Gly_rich 599..804 CDD:403882
Protein Kinases, catalytic domain 969..1239 CDD:473864
Blue background indicates that the domain is not in the aligned region.

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