DRSC/TRiP Functional Genomics Resources

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Protein Alignment sev and src-1

DIOPT Version :10

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:NP_001364829.1 Gene:src-1 / 171722 WormBaseID:WBGene00005077 Length:537 Species:Caenorhabditis elegans


Alignment Length:290 Identity:112/290 - (38%)
Similarity:154/290 - (53%) Gaps:27/290 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  2197 DIALLPQINW----SQLKLLRFLGSGAFGEVYEGQLK--TEDSEEPQRVAIKSLRKGASEFAELL 2255
            |::...|.||    :||.|.|.||.|.||||:.|:.:  .|       ||||:::.|.......|
 Worm   250 DLSHDTQQNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIVE-------VAIKTMKPGTMSPEAFL 307

  Fly  2256 QEAQLMSNFKHENIVCLVGICFDTESISLIMEHMEAGDLLSYLRAARATSTQEPQPTAGLSLSEL 2320
            ||||:|....|.|:|.|..:|...|...:|.|:|..|.||.|||...:|          |.:..|
 Worm   308 QEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMINGSLLQYLRTDGST----------LGIQAL 362

  Fly  2321 LAMCIDVANGCSYLEDMHFVHRDLACRNCLVTESTGSTDRRRTVKIGDFGLARDIYKSDYYRKEG 2385
            :.|...:|||..|||:...||||||.||.||.:......   .||:.||||||.:.:.|.|....
 Worm   363 VDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVP---VVKVADFGLARKLMEEDIYEART 424

  Fly  2386 EGLLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTLGQQPYAARNNFEVLAHVKEGGRLQQPP 2450
            ....|::|.:||:...|.||.:||||::|:|.:||:|.||.||...:|.||:..|:.|.|:..|.
 Worm   425 GAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPR 489

  Fly  2451 MCTEKLY-SLLLLCWRTDPWERPSFRRCYN 2479
            .|.|::| .:||.||...|..||:|...|:
 Worm   490 GCPEQIYEEVLLKCWDKTPDRRPTFDTLYH 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996
FN3 1993..2111 CDD:238020
PTKc_c-ros 2213..2483 CDD:270640 105/270 (39%)
src-1NP_001364829.1 SH3_Src_like 79..130 CDD:212779
SH2_Src_family 138..240 CDD:199827
PTKc_Src_like 270..522 CDD:270630 105/270 (39%)
Blue background indicates that the domain is not in the aligned region.

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