DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sev and mst1rb

DIOPT Version :9

Sequence 1:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster
Sequence 2:XP_009304468.1 Gene:mst1rb / 100134855 ZFINID:ZDB-GENE-071218-3 Length:1374 Species:Danio rerio


Alignment Length:886 Identity:214/886 - (24%)
Similarity:336/886 - (37%) Gaps:265/886 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1835 HWQQEL---------------DGENVQDRREWE------------AHERRL-ETA---------G 1862
            ||..|.               ||::......||            .||.:| |||         .
Zfish   546 HWVNESCPPVITEFFPKTAPPDGQSELTLCGWEFQSPLRPAISTRTHEVKLGETACVVQPHKSNC 610

  Fly  1863 THRLTGIKPGSGYSLWVQAHATPTKSNSSERLH--VRSFAELP----------ELQ--------- 1906
            ||.|..|:.|:..:|:...:.|..........|  :...||:|          |:|         
Zfish   611 THLLCKIRSGTTETLFKPLNVTAKVHEGQVEGHYSIDGSAEMPGFTFVVPNITEVQPDYGPVDGG 675

  Fly  1907 -LLEL-GPY-----SLSLTWAGTPDPLGSLQLECRSSAEQLRRNVAGNHTKMVVEPLQPRTRYQC 1964
             |:.: |||     :..:|..|...|:.|:             :||..:...:|...||.|..:.
Zfish   676 TLITITGPYLDSGKNRKVTLDGESCPVQSV-------------SVARGNLSSIVCLSQPVTEVKD 727

  Fly  1965 RLLLGY-----AATPGAPLYHGTAEVYETLGDAPSQPG--------------------KPQLEHI 2004
            .:|..|     ..|.....|..|.|:...|.|.....|                    ||:..|:
Zfish   728 VVLRVYIDKSRVMTTKVFRYKKTPEILAVLPDCSFDSGSRIIIEGRNLDSVYRTVVYFKPKESHL 792

  Fly  2005 AEEVFRVTWTAARGNGAPIALYNLEALQARSDIRRRRRRRRRNSGGSL----------------- 2052
                 :...|..||...|..:..:..:..|.:...          |.|                 
Zfish   793 -----KPVSTECRGKAKPTRMECITPVFPRDETEE----------GELSFDMDGVLGLWKHDFSY 842

  Fly  2053 ----EQLPWAEE-----------PVVVEDQWLDFCNT-------------------TELSCIVKS 2083
                :.:|:..|           .|.:..|.|:..::                   .|::|.:.:
Zfish   843 HPYGKPIPFETEGHILRLYPGFDEVSLHHQKLNLVSSCMSITMTVGDVDCGGKVLDNEITCRIPN 907

  Fly  2084 --LHSSRLLLFRVRARSLEHGWGPYSEESERVAEPFVSPEKRGSLVLAIIAPAAIVSSCVLALVL 2146
              ...|..|..:|......|..|...         .||......:||.|:  ||:|:..|||.::
Zfish   908 NLTIPSEGLPVKVTVNGYTHNVGTVI---------LVSNHYMVGIVLGIL--AALVTGAVLAFIV 961

  Fly  2147 VRKVQKRRLRAKKLLQ-QSRPSIWSN---------------------LSTLQTQQQLMAVRNRAF 2189
            ::.::|:    ||..| ::|.|.:|:                     |:::......:|....|:
Zfish   962 LKNLRKQ----KKASQTENRLSYFSHSRSRNNSVDLSSLVDYRRDLPLTSITAPTGAVAFPGLAY 1022

  Fly  2190 STTLSDADIALLPQ--------------------INWSQLKL--LRFLGSGAFGEVYEGQLKTED 2232
            :.||......|:|.                    |..|.||:  .:.:|.|.||.||.|.| |:.
Zfish  1023 TGTLDTTLTPLMPPEKISITSFRPELLEEVKDVLIPASTLKVHHHQIIGKGHFGTVYHGYL-TDH 1086

  Fly  2233 SEEPQRVAIKSLRK--GASEFAELLQEAQLMSNFKHENIVCLVGICFDTESISL-IMEHMEAGDL 2294
            :......|:|||.:  ...|..:.|:|..||..|.|.|::.|:||....|.:.| ::.:|:.|||
Zfish  1087 NNREIHCAVKSLNRITDVEEVEQFLKEGILMKGFHHSNVLSLLGILLPEEGLPLVVLPYMKHGDL 1151

  Fly  2295 LSYLRAARATSTQEPQPTAGLSLSELLAMCIDVANGCSYLEDMHFVHRDLACRNCLVTESTGSTD 2359
            ..::|.      :...||    :.:|:...:.||.|..||....|||||||.|||::.||     
Zfish  1152 RHFIRC------ENRNPT----VKDLIGFGLQVAKGMEYLAQKKFVHRDLAARNCMLDES----- 1201

  Fly  2360 RRRTVKIGDFGLARDIYKSDYY--RKEGEGLLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILT 2422
              .|||:.|||:|||:.:.:||  :...:..|||:||:.|||....|||:||||:||||.||:||
Zfish  1202 --YTVKVADFGMARDVLEKEYYSVQDHRKAKLPVKWMAIESLQTQKFTTKSDVWSFGVLMWEMLT 1264

  Fly  2423 LGQQPYAARNNFEVLAHVKEGGRLQQPPMCTEKLYSLLLLCWRTDPWERPSFRRCYNTLHAISTD 2487
            .|..||...:.::|..::.:|.||.||..|.:.|::::|.||..||.:||||....:.:.:|.:.
Zfish  1265 RGASPYPEVDPYDVTHYLLKGRRLPQPQYCPDPLFAIMLQCWDPDPEKRPSFSTLVSAVMSILSS 1329

  Fly  2488 LRRTQMASATADTVVSCSRP-----------EFKVRFDGQP 2517
            |......|... |.|:..:|           |:....|.:|
Zfish  1330 LEGEHYISLKV-TYVNLDQPRPYPALTDSADEYDSSDDNEP 1369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sevNP_511114.2 fn3 439..520 CDD:278470
FN3 826..921 CDD:238020
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
FN3 1799..1897 CDD:238020 21/100 (21%)
FN3 1993..2111 CDD:238020 23/190 (12%)
Pkinase_Tyr 2209..2481 CDD:285015 107/278 (38%)
PTKc_c-ros 2213..2483 CDD:270640 105/274 (38%)
mst1rbXP_009304468.1 Sema_MET_like 41..506 CDD:200509
PSI 511..553 CDD:214655 3/6 (50%)
IPT 553..658 CDD:214657 21/104 (20%)
IPT_plexin_repeat2 660..748 CDD:238584 19/100 (19%)
IPT_PCSR 751..844 CDD:238337 14/107 (13%)
PTKc_Met_Ron 1068..1329 CDD:270649 106/278 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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