DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-4 and SET6

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_015160.1 Gene:SET6 / 855938 SGDID:S000006086 Length:373 Species:Saccharomyces cerevisiae


Alignment Length:390 Identity:65/390 - (16%)
Similarity:117/390 - (30%) Gaps:157/390 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 YRVEHSDIYGRYLVANRQLEAGETLIREEPLAIGPCVSGD---PVCLGCYHPVSLKADQYR---- 106
            ::|..:...||...:|..:..|.|:::..... |..:|.:   .||..|:...:.|..:|:    
Yeast    14 FQVRQTKWGGRACFSNGNIPKGTTVLQVSNFT-GTSISYEFRKEVCHNCFAYANAKTMKYKLNYD 77

  Fly   107 ------CP-----------GCAWPLCGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPA 154
                  |.           |.....|...|                              |....
Yeast    78 YLRDLVCNAHYQINPKKFLGAGLWFCSEHC------------------------------RTSYL 112

  Fly   155 EVRDLYELVMIVRILLLRQHDPEQFALIARMESHTE-ERRQNAVL---------WRHYEEKVVQR 209
            ::.::.||:....|||  .|.|   :::.|....:| |.:.|::|         |...|.|.:.|
Yeast   113 QIPNIIELIECYEILL--HHFP---SMLKRYNYTSEQEEKLNSILISENVIQSSWDEIESKWIPR 172

  Fly   210 LR---------------------------------------VTWQ----LEDLEAEQV------- 224
            :.                                       :|::    |:..|..::       
Yeast   173 INNMKSAKRINQLPPTCEDEYCCIRFVCESLFNLKYMDPQCITYRAFNMLQSNELSKISKFPVLL 237

  Fly   225 ---------------------------HEVCGILDVNCFEIGQNGAKART-------LYPSAFLL 255
                                       ..:.|....|.|.:.|.|..:.:       ::|.|...
Yeast   238 HFQKLVFQTLYILLPSHLHRMLSIPLLRHILGTEYGNAFGLWQEGEASDSREYFGYWVFPEASYF 302

  Fly   256 AHDCTPNTAHTDDPSSFEILLRTSRRVREREALTLSYAYTLQ-GTLKRRAFMHEGKLFWCCCRRC 319
            .|.|.||.......:|  :|...:|.:::.|.:.:.|:..|. .|:|||||:.:...|.|.|.||
Yeast   303 NHSCNPNITKYRKGNS--MLFTMNRDIKKDEQICIDYSGVLDLPTVKRRAFLADSWFFDCACERC 365

  Fly   320  319
            Yeast   366  365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None
SET6NP_015160.1 SET <1..370 CDD:225491 65/390 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.