DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-4 and SDG37

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_849969.2 Gene:SDG37 / 816300 AraportID:AT2G17900 Length:485 Species:Arabidopsis thaliana


Alignment Length:518 Identity:115/518 - (22%)
Similarity:199/518 - (38%) Gaps:108/518 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GRYLVANRQLEAGETLIREEPLAIGPCV----SGDPVCLGCYHPVSLKADQYRCPGC--AWPLCG 116
            ||.|...|....||.::.::|..   ||    |.:..|.||:...:||    :|..|  .| .||
plant    27 GRSLFTARDFRPGEVILSQKPYI---CVPNNTSSESRCDGCFKTNNLK----KCSACQVVW-YCG 83

  Fly   117 STCAGLK---HRHGHTETEC----QLYAERRA-------------VAGELLTERAGPAEVRDLYE 161
            |:|...:   ||     .||    :|..|:|.             :...|..|:..|....|.|.
plant    84 SSCQKSEWKLHR-----DECKALTRLEKEKRKFVTPTIRLMVRLYIKRNLQNEKVLPITTTDNYS 143

  Fly   162 LVMIVRILLLRQHDPEQFALIARMESHTEERRQNAVLWRHYEEKVVQRLRVTWQLEDLEAEQVHE 226
            ||..: :..:.:.|.:|..|.|:|.:..     |.:|                |...::..::.|
plant   144 LVEAL-VSHMSEIDEKQMLLYAQMANLV-----NLIL----------------QFPSVDLREIAE 186

  Fly   227 VCGILDVNCFEIGQNGAKAR--TLYPSAFLLAHDCTPNTAHTDDPSSFE---ILLRTSRRVRERE 286
            .......|...|..:..:.:  .|:|...::.|.|:||....     ||   .::|....:.:..
plant   187 NFSKFSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAVLV-----FEEQMAVVRAMDNISKDS 246

  Fly   287 ALTLSYAYTLQGTLKRRAFMHEGKLFWCCCRRCSD---PRELGTDCSALV----CATCRTGSVRA 344
            .:|:||..|...||.|:..:.|..||.|.|.|||:   |.::  :.||::    ||..:......
plant   247 EITISYIETAGSTLTRQKSLKEQYLFHCQCARCSNFGKPHDI--EESAILEGYRCANEKCTGFLL 309

  Fly   345 VDPLQQTGDWACDRCAHKMGATEVERQLDRINNDLEDID--VHDIPGLEN---FLLRYRDVLRPN 404
            .|| ::.| :.|.:|.......||:    ::.:||:.:.  ....|..|:   .:..|:.:.:  
plant   310 RDP-EEKG-FVCQKCLLLRSKEEVK----KLASDLKTVSEKAPTSPSAEDKQAAIELYKTIEK-- 366

  Fly   405 HYLLLSAKYSLCQIYGRTEGYLLPQMSPEDIARKE-SYCREFLEIVDVLDPGLTRLRGLIMYELH 468
              |.:...:|......||...||..:...:|.|:. :|||..:.:...:.|....|.||..|...
plant   367 --LQVKLYHSFSIPLMRTREKLLKMLMDVEIWREALNYCRLIVPVYQRVYPATHPLIGLQFYTQG 429

  Fly   469 APVMVLAQSAFQSGQISRQEFQRRLKEVVKLLQVSRDI---LLMEPEGSTENAMGQAAADALS 528
            ....:|.::         :|....|.:...:|::|..|   .:.|.....|.|..:|:...|:
plant   430 KLEWLLGET---------KEAVSSLIKAFDILRISHGISTPFMKELSAKLEEARAEASYKQLA 483



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 60 1.000 Domainoid score I3856
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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