DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and Smyd3

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_081464.1 Gene:Smyd3 / 69726 MGIID:1916976 Length:428 Species:Mus musculus


Alignment Length:505 Identity:114/505 - (22%)
Similarity:182/505 - (36%) Gaps:155/505 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RYLVANR--------QLEAGETLIREEPLAIGPCV-SGDPVCLGCYHPVSLKADQYRCPGC---- 110
            ::..|||        .|..||.|.|.:|||...|. |...||..|   :..|....||..|    
Mouse     8 KFTTANRGNGLRAVAPLRPGELLFRSDPLAYTVCKGSRGVVCDRC---LLGKEKLMRCSQCRIAK 69

  Fly   111 ---------AWPLCGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPAEVRDLYELVMIV 166
                     |||.....|:.||        .|:              .|..|..||.|..  :||
Mouse    70 YCSAKCQKKAWPDHRRECSCLK--------SCK--------------PRYPPDSVRLLGR--VIV 110

  Fly   167 RILLLRQHDPEQFALIARMESH----TEER----RQNAVLWRHYEEKVVQ---RLRVTWQLEDLE 220
            :::..:..:.|:......:||:    ||::    ||.|:.::|:..:.:|   :|..::.|.:..
Mouse   111 KLMDEKPSESEKLYSFYDLESNISKLTEDKKEGLRQLAMTFQHFMREEIQDASQLPPSFDLFEAF 175

  Fly   221 AEQVHEVCGILDVNCFEIGQNGAKARTLYPSAFLLAHDCTPNTAHT-DDPSSFEILLRTSRRVRE 284
            |:.:.....|.:....|:|..      ||||..||.|.|.||.:.. :.|   .:|||..|.:..
Mouse   176 AKVICNSFTICNAEMQEVGVG------LYPSMSLLNHSCDPNCSIVFNGP---HLLLRAVREIEA 231

  Fly   285 REALTLSYAYTLQGTLKRRAFMHEGKLFWCCCRRCSDPRELGTDCSALVCATCRTGSVRAVDPLQ 349
            .|.||:.|...|..:.:||..:.:...|.|.|.||....:   |...|                 
Mouse   232 GEELTICYLDMLMTSEERRKQLRDQYCFECDCIRCQTQDK---DADML----------------- 276

  Fly   350 QTGD---WACDRCAHKMGATEVERQLDRINNDLEDIDVHDIPGLENFLLRYRDVLRPNHYLLLSA 411
             |||   |           .||:..|.:|    |::..|         .::..||          
Mouse   277 -TGDEQIW-----------KEVQESLKKI----EELKAH---------WKWEQVL---------- 306

  Fly   412 KYSLCQIYGRTEGYLLP-----QMSPEDIAR---------KES--YCREFLEIVDVLDPGLTRLR 460
              :|||....:....||     |:...|.|.         :|:  |....:|...:..||...:|
Mouse   307 --ALCQAIINSNSNRLPDINIYQLKVLDCAMDACINLGMLEEALFYAMRTMEPYRIFFPGSHPVR 369

  Fly   461 GL-IM----YELHAPVMVLAQS----AFQSGQISRQEFQRRLKEVVKLLQ 501
            |: :|    .:||..:...|..    ||...:::.......:::::.||:
Mouse   370 GVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMKVTHGREHSLIEDLILLLE 419

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None
Smyd3NP_081464.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000250|UniProtKB:Q9H7B4 14..16 1/1 (100%)
zf-MYND 49..87 CDD:280009 9/40 (23%)
SET <201..239 CDD:279228 14/40 (35%)