DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-4 and SMYD3

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001161212.1 Gene:SMYD3 / 64754 HGNCID:15513 Length:428 Species:Homo sapiens


Alignment Length:498 Identity:111/498 - (22%)
Similarity:175/498 - (35%) Gaps:147/498 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GRYLVANRQLEAGETLIREEPLAIGPCV-SGDPVCLGCYHPVSLKADQYRCPGC----------- 110
            |..|.|...|..||.|.|.:|||...|. |...||..|   :..|....||..|           
Human    15 GNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRC---LLGKEKLMRCSQCRVAKYCSAKCQ 76

  Fly   111 --AWPLCGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPAEVRDLYELVMIVRILLLRQ 173
              |||.....|..||        .|:              .|..|..||.|..:|.  :::....
Human    77 KKAWPDHKRECKCLK--------SCK--------------PRYPPDSVRLLGRVVF--KLMDGAP 117

  Fly   174 HDPEQFALIARMESH----TEER----RQNAVLWRHYEEKVVQ---RLRVTWQLEDLEAEQVHEV 227
            .:.|:......:||:    ||::    ||..:.::|:..:.:|   :|...:.|.:..|:.:...
Human   118 SESEKLYSFYDLESNINKLTEDKKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFEAFAKVICNS 182

  Fly   228 CGILDVNCFEIGQNGAKARTLYPSAFLLAHDCTPNTAHT-DDPSSFEILLRTSRRVREREALTLS 291
            ..|.:....|:|..      ||||..||.|.|.||.:.. :.|   .:|||..|.:...|.||:.
Human   183 FTICNAEMQEVGVG------LYPSISLLNHSCDPNCSIVFNGP---HLLLRAVRDIEVGEELTIC 238

  Fly   292 YAYTLQGTLKRRAFMHEGKLFWCCCRRCSDPRELGTDCSALVCATCRTGSVRAVDPLQQTGD--- 353
            |...|..:.:||..:.:...|.|.|.||....:   |...|                  |||   
Human   239 YLDMLMTSEERRKQLRDQYCFECDCFRCQTQDK---DADML------------------TGDEQV 282

  Fly   354 WACDRCAHKMGATEVERQLDRINNDLEDIDVHDIPGLENFLLRYRDVLRPNHYLLLSAKYSLCQI 418
            |           .||:..|.:|    |::..|         .::..||            ::||.
Human   283 W-----------KEVQESLKKI----EELKAH---------WKWEQVL------------AMCQA 311

  Fly   419 YGRTEGYLLP-----QMSPEDIAR---------KES--YCREFLEIVDVLDPGLTRLRGL-IM-- 464
            ...:....||     |:...|.|.         :|:  |....:|...:..||...:||: :|  
Human   312 IISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 376

  Fly   465 --YELHAPVMVLAQS----AFQSGQISRQEFQRRLKEVVKLLQ 501
              .:||..:...|..    ||...:::.......:::::.||:
Human   377 GKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLE 419

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None