DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and AT1G26761

DIOPT Version :10

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001117357.1 Gene:AT1G26761 / 6241260 AraportID:AT1G26761 Length:444 Species:Arabidopsis thaliana


Alignment Length:70 Identity:16/70 - (22%)
Similarity:29/70 - (41%) Gaps:18/70 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 SHTEERRQNAVLWRHYEEKVVQRLRVTWQLEDLEA-----EQVHEVCGILDVNCFEIGQNGAKAR 246
            |.::.|..::|.|.:|.....:  .|.:|.:|..:     |:.| :|          .:|..|:|
plant   168 SSSKVRANSSVYWMYYTGYTKE--TVEFQSQDFTSVLGNPERFH-LC----------DENAEKSR 219

  Fly   247 TLYPS 251
            ..|.|
plant   220 VYYRS 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 5/22 (23%)
AT1G26761NP_001117357.1 GH43_62_32_68_117_130 <99..>130 CDD:449341
GH43_62_32_68_117_130 202..430 CDD:449341 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.

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