DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and smyd2b

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001025394.1 Gene:smyd2b / 568616 ZFINID:ZDB-GENE-041001-201 Length:437 Species:Danio rerio


Alignment Length:476 Identity:94/476 - (19%)
Similarity:158/476 - (33%) Gaps:133/476 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 EQSPSPTEEKELPYRVEHSDIYGRYLVANRQLEAGETLIR----EEPLAIGPCVSGDPVCLGCYH 96
            ||..||.:              ||.|..:|....||.|..    ...|::|   ....:|..|: 
Zfish    11 EQFASPGK--------------GRGLRVSRAYGVGELLFSCPAYSYVLSVG---ERGLICEQCF- 57

  Fly    97 PVSLKADQYRCPGCAWPL-CGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPAEVRDLY 160
              :.|....:|..|.... |.:.|.  |......:.|||...        ...|...|:|...|.
Zfish    58 --TRKKGLAKCGKCKKAFYCNANCQ--KKNWPMHKLECQAMC--------AFGENWRPSETVRLV 110

  Fly   161 ELVMIVRILLLRQHDP-EQFALIARMESHTE----ERRQN-----AVLWRHYEEKVVQRLRVTWQ 215
            ..: |.|:...::..| |...|:..||:|.|    |:|:.     |.|.:.|.:.:        .
Zfish   111 ARI-IARLKAQKERSPSEILLLLGEMEAHLEDMDNEKREMTEAHIAGLHQFYSKHL--------D 166

  Fly   216 LEDLEA-----EQVHEVCGILDVNCFEIGQNGAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEIL 275
            ..|.:|     .|||  |....|...|:...|.   .::|...||.|.|:||...|....:.|: 
Zfish   167 FPDHQALLTLFSQVH--CNGFTVEDEELSNLGL---AIFPDIALLNHSCSPNVIVTYRGINAEV- 225

  Fly   276 LRTSRRVREREALTLSYAYTLQGTLKRRAFMHEGKLFWCCCRRCSDPRELGTDCSALVCATCRTG 340
             |..:.:...:.:..||...|..|..|...:.:...|.|.|:.|                     
Zfish   226 -RAVKDISPGQEIYTSYIDLLYPTADRLERLRDMYYFSCDCKEC--------------------- 268

  Fly   341 SVRAVDPLQQTGDWACDRCAHKMGATEVERQLDRI-NNDLEDIDVHDIPGLENFLLRYRDVLRPN 404
            :.:::|.::.:                |.::.|.| ..:::|:..:....:|||    |...:..
Zfish   269 TTKSMDVVKMS----------------VRKRSDEIGEKEIKDMVRYARNSMENF----RRAKQDK 313

  Fly   405 HYLLLSAKYSLCQ--------IYGRTEGYLLPQM--------SPEDIARKESYCREFLEIVDVLD 453
            :.|..|....:|:        ::..:..|:|..|        ..||......|..:.::...||.
Zfish   314 NILCGSFILEMCELSIDKMSTVFDDSNVYILHMMYQAMGICLFTEDYEGAVRYGEKVIKPFTVLY 378

  Fly   454 PGLTRLRGLIMYELHAPVMVL 474
            |.         |.::...|.|
Zfish   379 PA---------YSMNVASMFL 390

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None
smyd2bNP_001025394.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000250 18..20 0/15 (0%)
zf-MYND 53..91 CDD:280009 8/42 (19%)
Peptide substrate binding. /evidence=ECO:0000250 184..186 0/1 (0%)
SET <205..241 CDD:279228 9/37 (24%)