DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and smyd5

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001004614.2 Gene:smyd5 / 447875 ZFINID:ZDB-GENE-040912-39 Length:415 Species:Danio rerio


Alignment Length:386 Identity:71/386 - (18%)
Similarity:125/386 - (32%) Gaps:153/386 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SDIYGRYLVANRQLEAGETLIREEPL--------------AIGPC-------------VSGDPVC 91
            :::.|:.|.|.:..:.|:|:..|.||              |...|             :||.|..
Zfish    28 NNVKGKGLFAKKPFKKGDTIFIERPLVSSQFLWNALYKYRACEYCLRALETAEENARRLSGLPAL 92

  Fly    92 LGCYHP--VSLKADQYR-CPGCAWPLCGSTC--AGLKHRHGHTETECQLYAERRAVAGELLTERA 151
            : ..||  ..::.|::: ||.|....|.|.|  |.:...|                  ::|.  .
Zfish    93 I-LPHPELCKVRPDRHQACPQCQVMYCSSECRQAAMDQYH------------------KILC--L 136

  Fly   152 GPA---------EVRDLYELVMIVRILLLRQHDPEQFA---LIARMESHTEERRQNAVLWR---- 200
            ||:         :::|.:..|          |.|.:.:   ::|:|.: |.::.|:...|:    
Zfish   137 GPSNDDPDHPVNKLQDAWRSV----------HFPPETSSVMILAKMVA-TIKQTQDKERWQRLFT 190

  Fly   201 -------HYEEKVVQRL---RVTWQLEDLE----------------------------------- 220
                   :.||::|.:|   :...||..|.                                   
Zfish   191 NFCSRTANEEEEIVHKLLGEKFQGQLGLLRNLFTTALYEDRLSQWFTPEGFRSLFSLVGTNGQGI 255

  Fly   221 -----AEQVHEVCGILDVNCFEIGQNGAKARTLY---------------PSAFLLA----HDCTP 261
                 ::.|| .|..|::...:..|..|....||               ...|||.    |.|.|
Zfish   256 GTSSLSQWVH-ACDALELPRQQREQLDAFIDQLYKDIDKETGDFLNCEGSGLFLLQSSCNHSCVP 319

  Fly   262 NTAHTDDPSSFEILLRTSRRVREREALTLSYAYTLQGTLKRRA---FMHEGKLFWCCCRRC 319
            |...:...::|.:.|.....:...|.:.:||....|....|.:   .:.|..||.|.|::|
Zfish   320 NAEASFPENNFLLHLTALGDIGPGEEICISYLDCCQRDRSRHSRHKILRENYLFICSCQKC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None
smyd5NP_001004614.2 zf-MYND 100..135 CDD:280009 9/52 (17%)
SET <293..350 CDD:214614 10/56 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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