DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and SmydA-6

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster


Alignment Length:498 Identity:144/498 - (28%)
Similarity:226/498 - (45%) Gaps:51/498 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VEHSDIYGRYLVANRQLEAGETLIREEPLAIGPCVSGDPVCLGCYHPVSLKADQYRCPGCAWPLC 115
            ::.:|..||:.||...:.|||||:.|.|:.:.| :.|:..|..|::     ..:..|..|.....
  Fly    14 IKQNDTLGRFAVALCNVRAGETLLLENPIVVLP-LMGERRCSKCFN-----LTESFCRKCRLLAL 72

  Fly   116 GSTCAGLKHRHGHTETECQLYAERRAVAG--ELLTERAGPAEVRDLYELVMIVRILLLRQHDPEQ 178
            ...|:      .|.|.:|:..||......  |||       :.::..|:..:::.||||:|: |.
  Fly    73 CEDCS------DHDERDCKRLAEMNFSDDQVELL-------QKKEHTEIQPVLKCLLLREHE-ET 123

  Fly   179 FAL---IARMESHTEERRQNAVLWRHYEEKVVQRLRVTWQLEDL----EAEQVHEVCGILDVNCF 236
            ..|   :::|:|....||...| |::|:|.....|.....|..|    :.:.|..:.||||:|.:
  Fly   124 LPLYEEMSQMDSQLMTRRGTEV-WKNYQEHAFTPLDYGGVLAQLRGAADEDLVQGLLGILDINAY 187

  Fly   237 EI--GQNGAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEILLRTSRRVREREALTLSYAYTLQGT 299
            ||  .:.|...|.||..|.|.||.||||...:.|... .|.:..:|.:...|.|...|...|.||
  Fly   188 EIRAPEVGGAMRGLYRRAGLFAHSCTPNLVISIDDEQ-RIKVYANRFIAAGEILYNCYTNVLLGT 251

  Fly   300 LKRRAFMHEGKLFWCCCRRCSDPRELGTDCSALVCATCRTGS---VRAVDPLQQTGDWAC-DRCA 360
            .:||..:..||.|.|.|.||.||.||||..|:.:|:.|....   ||..|    ||.|.| ....
  Fly   252 EERRKILKVGKCFDCSCPRCQDPTELGTHMSSFICSQCSCVDGYIVRQPD----TGIWQCLLNPE 312

  Fly   361 HKMGATEVERQLDRINNDLEDIDVH---DIPGLENFLLRYRDVLRPNHYLLLSAKYSLCQIYGRT 422
            |.:....|...|:|...::    .|   ||...|..|.:...:|..||:|:|..|.::..|..:.
  Fly   313 HTLKQEFVSNMLERAKEEI----FHARDDIYRQELLLAKLSRLLHRNHFLMLDLKQNIASILRQI 373

  Fly   423 EGYLLPQMSPEDIARKESYCREFLEIVDVLDPGLTRLRGLIMYELHAPVMVLAQSAFQSGQISRQ 487
            ...:..:.:.:...||...|:|.|.::.|:.||::||:.:.:|||......||:..:...:.|..
  Fly   374 LQNMGTRPNKKVYERKIRLCQEILLVLKVVTPGISRLKAIALYELANTQAELARKMYTEMEHSAN 438

  Fly   488 EFQRRLKEVVKLLQVSRDILLMEPEGSTENAMGQAAADALSKM 530
            :....|:.|..:|:.|..:||.||..:.|   ||.....|.::
  Fly   439 DLLAELERVEVMLRESLRMLLFEPLATPE---GQLTRSMLREL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None
SmydA-6NP_611182.1 SET <179..244 CDD:279228 24/65 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I1875
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46455
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2203
65.970

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