DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and dao

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster


Alignment Length:355 Identity:75/355 - (21%)
Similarity:123/355 - (34%) Gaps:116/355 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GQQSK----DKQEQQDKEQ---SPSPTEEKELPYRVEHSDIYGRYLVAN-RQLEAGETLIREEPL 79
            |||.|    |:...:|:.|   ..:|.:.::|...:|..|:......|. .:.|.||   .::.|
  Fly    59 GQQLKHLNADELLHKDELQLLLLITPVQRQKLSRNLEDGDLEASTSAAPLSRPENGE---EDDDL 120

  Fly    80 --AIG------PCVSGDPVCLGCYHPVSLKADQYRCPGCAWPLCGSTCAGLKHRHGHTETECQLY 136
              |:|      |..:.:||.  .:.|..||..|:                |:|:.||.::|.:..
  Fly   121 IGAVGGLGISSPTTTKEPVL--DFRPHVLKWFQH----------------LRHQTGHFKSEEESR 167

  Fly   137 AERRA------------VAGELLTERAGPAEVRDLY---------ELVMIVRILLLRQHD----- 175
            ..|.|            .|.:|.||....|..|:..         .||:....|....:|     
  Fly   168 RLREAGNDSYRKERHPLKASDLFTEAIFLAPARNTLAAALAHANRSLVLFDCGLYAESYDDCLCA 232

  Fly   176 -----PEQF-ALIARMESHTEERRQNAVLWRHYEEKVVQRLRVTWQLEDLEAEQVHEV---CGIL 231
                 ||:: .||...::....:.:|..|   .||.:.:.|.:  :|..:...:.||:   |.:|
  Fly   233 LDLGYPEEYLPLIKLRQAACALKLRNFAL---CEEHLHELLHI--ELNQVFEARTHELWHQCEVL 292

  Fly   232 DVNCFEIGQNGAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEIL-------LRTSRRVREREALT 289
            .|..||:...                  |.:....:|..:|||.       |.|:|.|.:...:.
  Fly   293 KVERFEMAVQ------------------TGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIF 339

  Fly   290 LSYAYTLQGTLKRRAFMHEGKLFWCCCRRC 319
            .|.|.         |.:..|.     ||.|
  Fly   340 ESEAV---------AMVPSGN-----CRVC 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None
daoNP_001260462.1 TPR_11 165..235 CDD:290150 12/69 (17%)
TPR repeat 200..235 CDD:276809 5/34 (15%)
TPR repeat 243..270 CDD:276809 6/29 (21%)
zf-MYND 355..395 CDD:280009 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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