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Protein Alignment SmydA-4 and Smyd4

DIOPT Version :9

Sequence 1:	NP_572675.1	Gene:	SmydA-4 / 32034	FlyBaseID:	FBgn0030257	Length:	532	Species:	Drosophila melanogaster
Sequence 2:	NP_001096081.1	Gene:	Smyd4 / 319822	MGIID:	2442796	Length:	799	Species:	Mus musculus

Alignment Length:	634	Identity:	125/634 - (19%)
Similarity:	194/634 - (30%)	Gaps:	248/634 - (39%)

- Green bases have known domain annotations that are detailed below.

  Fly    20 QRGGQQSKDKQEQQDKEQSPSPTEE------KELPYRVEHSDI--------------YGRYLVAN 64
            ||..|..|.|  .|:||..|.|...      :::....|::.|              .||:|||.
Mouse   188 QRNVQHLKIK--IQEKETLPEPIPAALTNAFEDIALGEENTQISGASLSVSLCTHPLKGRHLVAT 250

  Fly    65 RQLEAGETLIREEP----LAIGP------CV---------SGDPVCLGCY-HPVSLKADQYRCPG 109
            :.:..||.|::|:.    |..|.      |:         |||..|..|. |.::    ...|..
Mouse   251 KDILPGELLVKEDAFVSVLIPGEMPRPHHCLENKWDTRVTSGDLYCHRCLKHTLA----TVPCGS 311

  Fly   110 CAW-PLCGSTCA----GLKHRHGHTETECQLYAERRAVAGELLTERAGPAEVRDLYELVMIVRIL 169
            |:: ..|...|.    .|.|     .|||.|       .|.|||        ..::..|.:...|
Mouse   312 CSYAKYCSQECMQQAWDLYH-----STECSL-------GGLLLT--------LGVFCHVALRMTL 356

  Fly   170 LLRQHD-------------------PEQ------------------------------------- 178
            |.|..|                   ||.
Mouse   357 LARFEDVDRVVRMLCDEVGSTDTCLPESKNLVKAFDYTSQGESEEKSKIGEPPIPGCNVNGKYGS 421

  Fly   179 -----FALIARMESHTEERR-----QNAVLWRHYEEKVVQ------------------------- 208
                 |:|:...|.|:.|.|     ..:.|.|..:...||
Mouse   422 NYNAIFSLLPHTEKHSPEHRFICAISVSALCRQLKADSVQAQTLKSPKLKAVTPGLCADLTVWGA 486

  Fly   209 -RLRVTWQLEDLEAEQVHEVCGILDVNCFEIGQNGA---------KARTLYPSAFLLAHDCTPNT 263
             .||...||: ..|:.:..:|        ..|.|.:         .|..::|...||.|.|.|||
Mouse   487 AMLRHMLQLQ-CNAQAITSIC--------HTGSNESIITNSRQIRLATGIFPVVSLLNHSCRPNT 542

  Fly   264 AHTDDPSSFE---ILLRTSRRVREREALTLSYA--YTLQGTLKRRAFMHEGKLFWCCCRRC---- 319
            :     .||.   ..:|.::|:.:.:.:...|.  .:..|..:|:..:.....|.|.|..|
Mouse   543 S-----VSFTGTVATVRAAQRIAKGQEILHCYGPHESRMGVAERQQRLSSQYFFDCRCGACHAET 602

  Fly   320 ----SDPRELGTDCSALVCATCRTGSVRAVDPLQQTGDWACDRCAHKMGATEVERQLDRINNDLE 380
                :.||     ..|..|.|||.        |.|..|..  .|:::.....|.|  |::.:.|:
Mouse   603 LRAAAAPR-----WEAFCCKTCRA--------LMQGNDVL--SCSNESCTNSVSR--DQLVSRLQ 650

  Fly   381 DIDVHDIPGLE-----------NFLLRYRDV----LRPNHYLLLSAKYSLCQIYGRTEGYLLPQM 430
            |:........:           ..|||.|:.    |...|.:|...:..|.|.:.....:|
Mouse   651 DLQQQVCMAQKLLRTGKPEQAIQQLLRCREAAESFLSAEHTVLGEIEDGLAQAHATLGNWL---- 711

  Fly   431 SPEDIARKESYCREFLEIVDVLDPGLTRLRGLIMYELHAPVMVLAQSAF 479
                  :..::.::.|::|:      || .|....|:...:..|||..|
Mouse   712 ------KSAAHVQKSLQVVE------TR-HGPSSVEIGHELFKLAQVLF 747

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.