Protein Alignment SmydA-4 and Smyd1

DIOPT Version :10

• Sequence 1: NP_572675.1
• Gene: SmydA-4 / 32034
• FlyBaseID: FBgn0030257
• Length: 532
• Species: Drosophila melanogaster
• Sequence 2: NP_001100065.1
• Gene: Smyd1 / 297333
• RGDID: 1305105
• Length: 490
• Species: Rattus norvegicus
• Alignment Length: 447
• Identity: 95/447 - (21%)
• Similarity: 159/447 - (35%)
• Gaps: 133/447 - (29%)

  Fly    51 VEHSDIY-----GRYLVANRQLEAGETLIREEPLAIGPCVSGDPVCLGCYHPVSLKADQYRCPGC 110
            :|:.:::     ||.|.|.::..|.:.:..|.  |....|....:...|:.....:...:||..|
  Rat     6 MENVEVFTSEGKGRGLKATKEFWAADVIFAER--AYSAVVFDSLINFVCHTCFKRQERLHRCGQC 68

  Fly   111 AWP-LCGSTC---AGLKHRHGHTETECQLYAERRAVAGELL---------TERAGPAEVRDLYEL 162
            .:. .|..||   |.|.|::     ||........|..|.:         .||.|..    |.|.
  Rat    69 KFAHYCDRTCQKDAWLNHKN-----ECSAIKRYGKVPNENIRLAARIMWRVEREGTG----LTEG 124

  Fly   163 VMIVRILLLRQHDPEQFALIARMESHTEERRQNAVLWRHYEEKVVQRLRVT-------W--QLED 218
            .::               .:..:::|.|          |:.|:..:.|||.       |  |.:.
  Rat   125 CLV---------------SVDDLQNHVE----------HFGEEEQKELRVDVDTFLQYWPPQSQQ 164

  Fly   219 LEAEQVHEVCGILDVNCFEIG-QNGAKA--RTLYPSAFLLAHDCTPNTA-------HTDDPSSF- 272
            ...:.:..:.|:::.|.|.:. |.|.:|  ..::|:..|:.|||.||..       |....|.|
  Rat   165 FSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFH 229

  Fly   273 ---EILLRTSRRVREREALTLSYAYTLQGTLKRRAFMHEGKLFWCCCRRCSDPRELGTDCSALVC 334
               .|.||...::.|.|.||:||...|..:.:||..:.:...|.|.|..|.  :.|..|....|
  Rat   230 TQMRIELRALGKISEGEELTVSYIDFLHLSEERRQQLKKQYYFDCSCEHCQ--KGLKDDLFLAV- 291

  Fly   335 ATCRTGSVRAVDPLQQTGDWACDRCAHKMGATEVERQLDRINND-LEDIDVHDIPGLENFLLRYR 398
                     ..||               ..:.||.:::.:.:.| ||.||.....||      |.
  Rat   292 ---------KEDP---------------KPSQEVVKEMTQFSKDTLEKIDKARSEGL------YH 326

  Fly   399 DVLRPNHYLLLSAKYSLCQ--------IYGRTEGYLLPQMSPEDIARKESYCREFLE 447
            :|::            ||:        ::..|..|:|..:|  .::...||.:.|.|
  Rat   327 EVVK------------LCRECLEKQEPVFADTNLYVLRLLS--IVSEVLSYLQAFEE 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmydA-4	NP_572675.1	SET_SMYD	<230..319	CDD:380997	30/102 (29%)
Smyd1	NP_001100065.1	SET_SMYD1	7..281	CDD:380924	69/311 (22%)
		zf-MYND	52..90	CDD:460312	10/42 (24%)