DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and Smyd5

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_659167.2 Gene:Smyd5 / 232187 MGIID:108048 Length:416 Species:Mus musculus


Alignment Length:387 Identity:73/387 - (18%)
Similarity:119/387 - (30%) Gaps:150/387 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 IYGRYLVANRQLEAGETLIREEPL--------------AIGPC-------------VSGDPVCLG 93
            |.|:.|.|.:.:..|||:..|.||              |...|             ::|.|..: 
Mouse    31 IKGKGLFATQLIRKGETIFIERPLVAAQFLWNALYQYRACDHCLRALEKAEENAQRLTGKPSQI- 94

  Fly    94 CYHP--VSLKADQYR-CPGCAWPLCGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPAE 155
            ..||  .|::.|.:: ||.|....|.:.|                    |..|.|...:...|..
Mouse    95 LPHPELCSVRKDLHQNCPHCQVMYCSAEC--------------------RLAAAEQYHQILCPGP 139

  Fly   156 VRD----LYELVMIVRILLLRQHDPEQFA---LIARMESHTEERRQN---AVLWRHY-------E 203
            ..|    |.:|....|.:    |.|.:.|   |:|||.:..::.:..   ..|:.|:       |
Mouse   140 SHDPRHPLNKLQEAWRSV----HYPPETASIMLMARMVATVKQAKDKDHWVRLFNHFCSRTANQE 200

  Fly   204 EKVVQRLRVTWQLEDLEAEQVHEVCGILDVNCFE------------------IGQNGAKART--- 247
            :.:|.:|     |:....:|:..:.|:.....:|                  :|.||....|   
Mouse   201 QAIVHKL-----LKGKFKDQLELLLGLFKEALYEEALSLWFTPEGFRSLFALVGTNGQGIGTSSL 260

  Fly   248 --------------------------LY---------------PSAFLLA----HDCTPNTAHTD 267
                                      ||               ...|:|.    |.|.||...:.
Mouse   261 SQWVHACDALELTPQDREQLDTFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAETSF 325

  Fly   268 DPSSFEILLRTSRRVREREALTLSYAYTLQGTLKRRA---FMHEGKLFWCCCRRC----SDP 322
            ..::|.:.:.....::..|.:.:||....|....|.:   .:.|..||.|.|.:|    .||
Mouse   326 PENNFVLHVTALEDIKPGEEICISYLDCCQRERSRHSRHKILRENYLFNCSCPKCLAEADDP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None
Smyd5NP_659167.2 SET <297..350 CDD:214614 8/52 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416 2/5 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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