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Protein Alignment SmydA-4 and Smyd2

DIOPT Version :9

Sequence 1:	NP_572675.1	Gene:	SmydA-4 / 32034	FlyBaseID:	FBgn0030257	Length:	532	Species:	Drosophila melanogaster
Sequence 2:	NP_081072.1	Gene:	Smyd2 / 226830	MGIID:	1915889	Length:	433	Species:	Mus musculus

Alignment Length:	468	Identity:	87/468 - (18%)
Similarity:	156/468 - (33%)	Gaps:	145/468 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    58 GRYLVANRQLEAGETLIREEPLAIGPCV----SGDPVCLGCYHPVSLKADQYRCPGCA------- 111
            ||.|.|.|....|:.|......|   ||    .....|..|:   :.|....:|..|.
Mouse    18 GRGLRALRPFHVGDLLFSCPAYA---CVLTVGERGHHCECCF---ARKEGLSKCGRCKQAFYCDV 76

  Fly   112 ------WPLCGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPAE-VRDLYELVMIVRIL 169
                  |||....|:.:                      .:|.|...|:| ||      :..|||
Mouse    77 ECQKEDWPLHKLECSSM----------------------VVLGENWNPSETVR------LTARIL 113

  Fly   170 LLRQHDP-----EQFALIARMESHTEE---------RRQNAVLWRHYEEKVVQRLRVTWQLEDLE 220
            ..::..|     |:...:...|||.::         :...|.|.:.|.:.:        :..|
Mouse   114 AKQKIHPERTPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKYL--------EFPD-- 168

  Fly   221 AEQVHEVCGIL--DVNC-------FEIGQNGAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEILL 276
                |....:|  .|||       .|:...|:   .::|...|:.|.|.||...|...:..|:
Mouse   169 ----HSSLVVLFAQVNCNGFTIEDEELSHLGS---AIFPDVALMNHSCCPNVIVTYKGTLAEV-- 224

  Fly   277 RTSRRVREREALTLSYAYTLQGTLKRRAFMHEGKLFWCCCRRCS---------DPRELGTDCSAL 332
            |..:.:...:.:..||...|..|..|...:.:...|.|.||.|:         :.|:|.:...|.
Mouse   225 RAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECTTKDKDKAKVEVRKLSSPPQAE 289

  Fly   333 VCATCRTGSVRAVDPLQQTGDWACDRCAHKMGATEV----ERQLDRINNDLEDIDVHDIPGLENF 393
            ........:...::..:        |..|....:|:    |...:::::..||.:|:.:..:...
Mouse   290 AIRDMVRYARNVIEEFR--------RAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQA 346

  Fly   394 L------------LRY-RDVLRP--NHYLLLSAKYS-----LCQIYGRTEGYLLPQMSPEDIARK 438
            :            |:| :.:::|  .||.:.|...:     |.::|          |..|:.|..
Mouse   347 MGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLY----------MGLENKAAG 401

  Fly   439 ESYCREFLEIVDV 451
            |...::.:.|::|
Mouse   402 EKALKKAIAIMEV 414

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.