DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and SMYD1

DIOPT Version :9

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_938015.1 Gene:SMYD1 / 150572 HGNCID:20986 Length:490 Species:Homo sapiens


Alignment Length:448 Identity:96/448 - (21%)
Similarity:160/448 - (35%) Gaps:133/448 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RVEHSDIY-----GRYLVANRQLEAGETLIREEPLAIGPCVSGDPVCLGCYHPVSLKADQYRCPG 109
            |:|:.:::     ||.|.|.::..|.:.:..|.  |....|....|...|:.....:...:||..
Human     5 RMENVEVFTAEGKGRGLKATKEFWAADIIFAER--AYSAVVFDSLVNFVCHTCFKRQEKLHRCGQ 67

  Fly   110 CAWP-LCGSTC---AGLKHRHGHTETECQLYAERRAVAGELL---------TERAGPAEVRDLYE 161
            |.:. .|..||   |.|.|::     ||........|..|.:         .||.|..    |.|
Human    68 CKFAHYCDRTCQKDAWLNHKN-----ECSAIKRYGKVPNENIRLAARIMWRVEREGTG----LTE 123

  Fly   162 LVMIVRILLLRQHDPEQFALIARMESHTEERRQNAVLWRHYEEKVVQRLRVT-------W--QLE 217
            ..::               .:..:::|.|          |:.|:..:.|||.       |  |.:
Human   124 GCLV---------------SVDDLQNHVE----------HFGEEEQKDLRVDVDTFLQYWPPQSQ 163

  Fly   218 DLEAEQVHEVCGILDVNCFEIG-QNGAKA--RTLYPSAFLLAHDCTPNTA-------HTDDPSSF 272
            ....:.:..:.|:::.|.|.:. |.|.:|  ..::|:..|:.|||.||..       |....|.|
Human   164 QFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMF 228

  Fly   273 ----EILLRTSRRVREREALTLSYAYTLQGTLKRRAFMHEGKLFWCCCRRCSDPRELGTDCSALV 333
                .|.||...::.|.|.||:||...|..:.:|:..:.:...|.|.|..|.  ::|..|..   
Human   229 HTQMRIELRALGKISEGEELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHCQ--KKLKDDLF--- 288

  Fly   334 CATCRTGSVRAVDPLQQTGDWACDRCAHKMGATEVERQLDRINND-LEDIDVHDIPGLENFLLRY 397
                 .|......|.|                 ||.:::.:.:.| ||.||.....||      |
Human   289 -----LGVKDNPKPSQ-----------------EVVKEMIQFSKDTLEKIDKARSEGL------Y 325

  Fly   398 RDVLRPNHYLLLSAKYSLCQ--------IYGRTEGYLLPQMSPEDIARKESYCREFLE 447
            .:|::            ||:        ::..|..|:|..:|  .::...||.:.|.|
Human   326 HEVVK------------LCRECLEKQEPVFADTNIYMLRMLS--IVSEVLSYLQAFEE 369

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 None
SMYD1NP_938015.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000250 17..19 0/1 (0%)
zf-MYND 52..90 CDD:307734 10/42 (24%)
SET <194..257 CDD:214614 19/62 (31%)