DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and LOC1274967

DIOPT Version :10

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_001688544.2 Gene:LOC1274967 / 1274967 VectorBaseID:AGAMI1_006910 Length:638 Species:Anopheles gambiae


Alignment Length:540 Identity:110/540 - (20%)
Similarity:171/540 - (31%) Gaps:169/540 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NSRARHQRGGQQSKDKQEQQDKEQSPSPTEEKELPYRVE--HSDIYGRYLVANRQLEAGETLIRE 76
            :.|..|..|..:.::......|....:.....:|...||  .:..:||:||..:.|:||:.|:.|
Mosquito   172 SDRVMHTPGQYRPRNSGYPASKLSYEAHANVPQLVKCVELRQNSEFGRHLVTTQHLKAGDVLLIE 236

  Fly    77 EPLAIGPCVSGDPV----CLGCYHPVSLKADQYR---CPGCAWPL-CGSTCAGLKHRHGHTETEC 133
            :|.|   .:..|..    |..|::     .|.:.   |.||...: |...|....:|..| ..||
Mosquito   237 KPYA---SMLNDKERYKRCAFCHN-----EDTFTLIPCEGCTLTMYCSDECMDKAYRQYH-RYEC 292

  Fly   134 QLYAERRAVAGELLTERAGPAEV--------------------------------------RDLY 160
            .:..:...:||.|:....|...|                                      .|:|
Mosquito   293 GVLRDCWRIAGRLVGGIVGLRMVATAIASFEQDLEGWVNHLNALDETKVNAFTVDWNKVTDSDIY 357

  Fly   161 ELV----------------------MIVRILLLRQHDPEQFALIARMESHTEERRQNAVLWRHYE 203
            :.|                      .||..|||.:.|...|.    ..|.|..:....:|.||::
Mosquito   358 DTVHVLATNQKRRSREDLAVLMFFTSIVHRLLLERTDLGPFC----EPSPTRSKLLFDLLLRHWQ 418

  Fly   204 EKVVQRLRV----TWQLEDLEAEQVHEVCGILDVNCFEIGQNGAKARTLYPSAFLLAHDCTPNTA 264
            ..::.:.:|    ..:.:|.|.|.........|.:..|...:...|..:||...::.|.|.||.|
Mosquito   419 TSLINKKQVYHVQRSEGQDEEDEYYEYNYAGYDSDDEEEYSDEMHAIAVYPLFSMVNHSCIPNVA 483

  Fly   265 --H-TDDPSSFEILLRTSRRVREREALTLSYAYTLQGTLKRRAFMHEGKLFWCCCRRCSDPRELG 326
              | .|...:|.    .:|.:...|.|...||:         |.|...:.|...|.|    :...
Mosquito   484 PIHLLDGRCAFV----ATRPIAAGEQLFDVYAF---------ASMDFDRSFRIFCLR----KSYY 531

  Fly   327 TDCSALVCATCRTGSVRAVDPLQQTGDWACDRCAHKMGATEVERQLDRINNDLEDIDVHDIPGLE 391
            ..|...||.:.....||.:.|.:                |...|.|..:|     :..|.:|.|.
Mosquito   532 FKCRCAVCESFSYVDVRNMTPQE----------------TNFLRLLRMVN-----VPEHQLPMLV 575

  Fly   392 NFL----LRYRDVLRPNHYLLLSAKYSLCQIYGRTEGYLLPQMSPEDIARKESYCREFLEIVDVL 452
            ..:    .||     |.|. ..:|:..|.:|......|.|     ||               |:|
Mosquito   576 EHMNEVGRRY-----PKHQ-YTAAEVVLVRILRMMHSYSL-----ED---------------DML 614

  Fly   453 D-------PG----LTRLRG 461
            :       ||    |:|.||
Mosquito   615 NTFGSIGLPGLAASLSRSRG 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 22/91 (24%)
LOC1274967XP_001688544.2 None

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