DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-4 and LOC1271020

DIOPT Version :10

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_061514761.1 Gene:LOC1271020 / 1271020 VectorBaseID:AGAMI1_009640 Length:337 Species:Anopheles gambiae


Alignment Length:395 Identity:67/395 - (16%)
Similarity:117/395 - (29%) Gaps:183/395 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 CGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPAEVRDLYELVMIVRILLLRQHDPEQF 179
            |.|...|..||:     ||.:                    :|||:.::.|..::.||       
Mosquito     7 CISKAYGKYHRY-----ECGV--------------------LRDLWTVLGISGVIALR------- 39

  Fly   180 ALIARMESHTEERRQNAVLWRHYEEKVVQRLRVTWQLEDLEAEQVHEVCGILD---VNCFEIGQN 241
             :||                          :.:|....|||..:.|  ...||   |:.|.:...
Mosquito    40 -MIA--------------------------IAITTFDNDLEKLKDH--LDALDESKVDGFTMDWK 75

  Fly   242 GAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEILLRTS---RRVREREALTLSYAYTLQGTLKRR 303
            .|..:.::            ||.|         :|.|:   |.::|...||.   :|:       
Mosquito    76 KATPQDVF------------NTVH---------VLCTNQERRNIKELAGLTF---FTV------- 109

  Fly   304 AFMHEGKLFWCCCRRCSDPRELGTDCSALVCATCRTGSVRAVDPLQQTGDWACDRCAHKMGATEV 368
             .||...|.|         .|||..|.|                         :..|.|:     
Mosquito   110 -VMHNHLLEW---------TELGPACEA-------------------------NPTASKL----- 134

  Fly   369 ERQLDRINNDLEDIDVHDIPGLENFLLRYRDVLRPNHYLLLSAKYSLCQIYGRTEGYLLPQMSPE 433
                                 |.:.:|||..:...|:.||...|              :...:||
Mosquito   135 ---------------------LLDLILRYLQITECNYKLLTCIK--------------ITNRNPE 164

  Fly   434 DIARKESYCREFLEIVDVLDPGLT-RLRGLIMYELHAPVMVLAQSA-----FQSGQISRQEFQRR 492
            |    |::......::.:|:.... .:|.||:.:....|:|:...|     |.:.::......|:
Mosquito   165 D----ETFATSCYPLISMLNHSCAPNVRRLILPDGRCAVIVIHTVAKGGQLFDNYEVDHWTKDRK 225

  Fly   493 LKEVV 497
            .::::
Mosquito   226 KRQII 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 19/94 (20%)
LOC1271020XP_061514761.1 None

Return to query results.
Submit another query.