DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and LOC1270692

DIOPT Version :10

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_309411.5 Gene:LOC1270692 / 1270692 VectorBaseID:AGAMI1_012617 Length:608 Species:Anopheles gambiae


Alignment Length:464 Identity:95/464 - (20%)
Similarity:155/464 - (33%) Gaps:152/464 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QSKDKQEQQDKEQSPS-PTEEKELPYRVE-----HSDIYGRYLVANRQLEAGETLIREEPLAIGP 83
            :.:|:..|:.|...|: ||    :|.||.     ::..|||::||.|||..|:.::.|:|.|   
Mosquito   184 EPEDQHAQELKLSYPAHPT----VPQRVADLQLCNNQQYGRHVVATRQLRVGDVVMVEKPYA--- 241

  Fly    84 CVSGDPV----CLGCY--HPVSLKADQYRCPGCAWPL-CGSTC--AGLKHRHGHTETECQLYAER 139
            .|..|.:    |..|:  .|..|    ..|..|...: |...|  |..:..|.:   ||.:..:.
Mosquito   242 TVLSDHMKRVRCAFCHAEEPFLL----IPCEECTIAMYCSQKCLRAAWQQYHRY---ECPILNDM 299

  Fly   140 RAVAGELLTERAGPAEVRDLYELVMIVRILLLR----QHDPEQFALIARMESHTEERRQNAVLWR 200
            |.:..|.               |.:.||.:.:.    .||                         
Mosquito   300 RTIGTEY---------------LALAVRTVAIALASFDHD------------------------- 324

  Fly   201 HYEEKVVQRLRVTWQLEDLEAEQVHEVCGILDVNCFEIGQNGAKARTLYPSAFLLAHDCTPNTAH 265
                           ||.|.|...|  ..:..||.||:....|..||:|.:.:.||.: ....|.
Mosquito   325 ---------------LEALRAHLSH--LDVSKVNAFEMDWRAASPRTVYETVYSLATN-QRKRAR 371

  Fly   266 TDDPSSFEILLRTSRRVRE--------------REALTLSYAYTLQGTLKRRAFMH------EGK 310
            .|...:..:.:.|.:.:.:              |:.|.....:.||.|:....|:|      |..
Mosquito   372 KDFALNVLVAMITHKLLLKRTPAAQVCGADPILRKTLLNLLLHHLQSTIVNHQFLHYMDYLAEQD 436

  Fly   311 LFWCCCRRCSDPRELGTDCSALV------CA------TCRTGSVRAVDPLQQTGD---------- 353
            ::        :|.|....|..|:      ||      |.|.|.. |:...:|..|          
Mosquito   437 VY--------EPDEYAIACFPLLSMLNHSCAPNVKRITMRDGRC-ALVVTRQIADGGQLFDHYDV 492

  Fly   354 --WACDRCAHKMGATEVERQLDRINNDLEDIDVHDIPGLENFLLRYRDVLRPNHYLLLSAKYSLC 416
              |...|...:    ::.:||.|...:.|.. |.|...|..|:.:|..   |..::|..:.|:..
Mosquito   493 HHWMIPRKQRQ----KILKQLYRFTCECEAC-VKDYGSLLTFVDKYSS---PVEFMLTGSIYARL 549

  Fly   417 QIYGRTEGY 425
            .:....|.:
Mosquito   550 MVQSEEEAF 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 21/108 (19%)
LOC1270692XP_309411.5 None

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