DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-4 and SMYD4

DIOPT Version :10

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens


Alignment Length:656 Identity:133/656 - (20%)
Similarity:204/656 - (31%) Gaps:240/656 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QRGGQQSKDKQEQQDKEQSPSPT------------EEKELPYRVEHS------DIYGRYLVANRQ 66
            ||...:.|.|.:::|......|.            ||.|.......|      .:.||.|||.:.
Human   188 QRNLHRLKMKMQEKDSLTESFPAALAKTLEDAALREENEQLSNASSSIGLCVDPLKGRCLVATKD 252

  Fly    67 LEAGETLIREE-------PLAIGP------------CVSGDPVCLGCY-HPVSLKADQYRCPGCA 111
            :..||.|::|:       |..:.|            ..:||..|..|. |.::    ...|.||:
Human   253 ILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKHTLA----TVPCDGCS 313

  Fly   112 W-PLCGSTCA----GLKHRHGHTETECQLYAERRAVAGEL------------LTERAGPAEVRD- 158
            : ..|...|.    .|.||     |||.|       .|.|            ||...|..:||. 
Human   314 YAKYCSQECLQQAWELYHR-----TECPL-------GGLLLTLGVFCHIALRLTLLVGFEDVRKI 366

  Fly   159 --------------LYELVMIVRILLLRQHDPEQ-------------------------FALIAR 184
                          |.|....|:.|.....:.|:                         |.|:..
Human   367 ITKLCDKISNKDICLPESNNQVKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAVFNLLPH 431

  Fly   185 MESHTEERR-----QNAVLWRHYEEKVVQRL---RVTWQLEDLEAEQVHEVC------GI----- 230
            .|:|:.|.:     ..:.|.|..|...:|.:   |:. ....|:|....|:|      |:     
Human   432 TENHSPEHKFLCALCVSALCRQLEAASLQAIPTERIV-NSSQLKAAVTPELCPDVTIWGVAMLRH 495

  Fly   231 -LDVNC-----FEIGQNGAK------------ARTLYPSAFLLAHDCTPNTAHTDDPSSF---EI 274
             |.:.|     ..|...|.|            |..::|...||.|.|:|||:     .||   ..
Human   496 MLQLQCNAQAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSCSPNTS-----VSFISTVA 555

  Fly   275 LLRTSRRVREREALTLSYA--YTLQGTLKRRAFMHEGKLFWC---------------------CC 316
            .:|.|:|:|:.:.:...|.  .:..|..:|:..:.....|.|                     ||
Human   556 TIRASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPACQTEAHRMAAGPRWEAFCC 620

  Fly   317 RRCSDPRELGTD---CSALVC---ATCRTGSVRAVDPLQQTGDWACDRCAHKM---GATEVERQL 372
            ..|..|.: |.|   |.:..|   |..|...|..:..|||.     .|.|.|:   |  |:||.:
Human   621 NSCGAPMQ-GDDVLRCGSRSCAESAVSRDHLVSRLQDLQQQ-----VRVAQKLLRDG--ELERAV 677

  Fly   373 DRINNDLEDIDVHDIPGLENFLLRYRDVLRPNHYLLLSAKYSLCQIYGRTEGYLLPQMSPEDIAR 437
            .|::....|        .|:||.....|:..    :.......|...|             |..:
Human   678 QRLSGCQRD--------AESFLWAEHAVVGE----IADGLARACAALG-------------DWQK 717

  Fly   438 KESYCREFLEIVDVLDPGLTRLRGLIMYELHAPVMV-LAQSAFQSGQISRQEFQRRLKEVVKLLQ 501
            ..::.:..|.:|:|               .|.|..| :....|:..||....|  .:.|.:..:|
Human   718 SATHLQRSLYVVEV---------------RHGPSSVEMGHELFKLAQIFFNGF--AVPEALSTIQ 765

  Fly   502 VSRDIL 507
            .:.::|
Human   766 KAEEVL 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 27/137 (20%)
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815
TPR repeat 68..96 CDD:276809
TPR repeat 101..135 CDD:276809
TPR repeat 143..171 CDD:276809
SET 239..>269 CDD:394802 9/29 (31%)
zf-MYND 296..335 CDD:460312 12/47 (26%)
SET_SMYD4 404..602 CDD:380934 40/203 (20%)
TPR_12 660..726 CDD:315987 16/97 (16%)
TPR_12 698..771 CDD:315987 15/106 (14%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.