DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-4 and smyd2

DIOPT Version :10

Sequence 1:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_002934751.2 Gene:smyd2 / 100495522 XenbaseID:XB-GENE-985583 Length:430 Species:Xenopus tropicalis


Alignment Length:442 Identity:84/442 - (19%)
Similarity:140/442 - (31%) Gaps:142/442 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PYRVEHSDIYGRYLVANRQLEAGETLIREEPLAIGPCVSGDPV-------------CLGCYHPVS 99
            |..:|..|..|:          |..|....|.|:|..:...|.             |..|:   :
 Frog     4 PEGLERFDSPGK----------GRGLKATRPFALGELLFSCPAYTYVLTVNERGNHCEFCF---A 55

  Fly   100 LKADQYRCPGCA-------------WPL----CGSTCAGLKHRHGHTETECQLYAERRAVAGELL 147
            .|....:|..|.             ||:    |.:.|.       :.:..|              
 Frog    56 RKEGLSKCGKCKQAFYCNVDCQKGDWPMHKLECSAMCT-------YGQNWC-------------- 99

  Fly   148 TERAGPAEVRDLYELVMIVRILLLRQHDPEQFALIARMESHTE-------ERRQN--AVLWRHYE 203
                 |:|...|...::..:.....:...|:|..:...|||..       |..||  |.|.|.|.
 Frog   100 -----PSETVRLTARILAKQKTQTERTASERFLSVKDFESHLSKLDNEKLELIQNDIAALHRFYS 159

  Fly   204 EKVVQRLRVTWQLEDLEAEQVHEVCGILDVNC-------FEIGQNGAKARTLYPSAFLLAHDCTP 261
            :.:..            ::...:|.....|||       .|:...|:   .::|...|:.|.|.|
 Frog   160 KNLHY------------SDNAAQVFLFAQVNCNGFTIEDEELSHLGS---AIFPDVALMNHSCCP 209

  Fly   262 NTAHTDDPSSFEILLRTSRRVREREALTLSYAYTLQGTLKRRAFMHEGKLFWCCCRRCS----DP 322
            |...|...:..|:  |..:.:...:.:..||...|..|..|...:.:...|.|.||.||    ||
 Frog   210 NVIVTYKGTVAEV--RAVQEIHAGDEVFTSYIDLLYPTEDRNDRLIDSYFFNCDCRECSTKQKDP 272

  Fly   323 -----RELGTDCSALVCATCRTGSVRAVDPLQQTGDWACDRCAHKMGATEV----ERQLDRINND 378
                 |:|....|..|.......:...|:..:        |..|....:|:    |..|:::.:.
 Frog   273 AKLEIRKLSDPPSPQVVRDMIKYARNVVEEFR--------RAKHYKTPSELLEICELSLEKMGSV 329

  Fly   379 LEDIDVHDIPGLENFL------------LRYRD-VLRP--NHYLLLSAKYSL 415
            .||.:|:.:..:...:            |:|.: :::|  .||    ..|||
 Frog   330 FEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGEKIIKPYSKHY----PPYSL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 23/95 (24%)
smyd2XP_002934751.2 SET_SMYD2 5..267 CDD:380979 59/317 (19%)
zf-MYND 50..88 CDD:460312 7/40 (18%)

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