DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42339 and THSD7B

DIOPT Version :9

Sequence 1:NP_572674.3 Gene:CG42339 / 32033 FlyBaseID:FBgn0259241 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001303278.1 Gene:THSD7B / 80731 HGNCID:29348 Length:1606 Species:Homo sapiens


Alignment Length:463 Identity:95/463 - (20%)
Similarity:147/463 - (31%) Gaps:168/463 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLPFVSGGSCREAQLC-CN-------GRDSSCVV---QKAPINAIIEDLSDKPCYCDHACLKLGD 70
            |.|.|      |.:|| |:       |..|.|::   ::.|...:......|.|         |:
Human   912 LYPLV------ETELCPCDEFISQPYGNWSDCILPEGRREPHRGLRVQADSKEC---------GE 961

  Fly    71 -------CCDD----------------FKDHCGV---LDCQVGDWGAWSECDRSCGTGMMTRNRQ 109
                   .|.|                .::.|.:   .||::.||.:|..|..|||.|:..|::.
Human   962 GLRFRAVACSDKNGRPVDPSFCSSSGYIQEKCVIPCPFDCKLSDWSSWGSCSSSCGIGVRIRSKW 1026

  Fly   110 ILQAAQNGGKHCPTLQQKR----------SCQGYRCHGHH--DKKILREMALLLPAALTHNHHV- 161
            :.:...|||:.||.|..|.          .|..|.....|  ..||..|:..|.....|.:..: 
Human  1027 LKEKPYNGGRPCPKLDLKNQVHEAVPCYSECNQYSWVVEHWSSCKINNELRSLRCGGGTQSRKIR 1091

  Fly   162 ------NESGDLRHNLRTRYRDTYKHNHDQEYCVEFEVIKSSKACNKLPPYN-LMTEG------- 212
                  .|.|.:..||                |.:.|:...:::|:.:.|.. :|:|.       
Human  1092 CVNTADGEGGAVDSNL----------------CNQDEIPPETQSCSLMCPNECVMSEWGLWSKCP 1140

  Fly   213 ---DRITVRCDLEALIQDSAGSSTTARTPQ---------------GPTTPSTTTVS-SAASAFGQ 258
               |..|::.....|::.|..|.|.|...|               ..|..||..:| :|....|.
Human  1141 QSCDPHTMQRRTRHLLRPSLNSRTCAEDSQVQPCLLNENCFQFQYNLTEWSTCQLSENAPCGQGV 1205

  Fly   259 RTDDLEEERLQRETSSEEEATNQDGEAEEEDEEPEQDEQDDLQNALDSDSNESTDYRHQRQS--- 320
            ||      ||.....|:.:..:.|           |.||.:|:             :.||.|   
Human  1206 RT------RLLSCVCSDGKPVSMD-----------QCEQHNLE-------------KPQRMSIPC 1240

  Fly   321 --------QMS---QMSHSRRTAGKRSAVPATPSPTLPPTYHCRGEGLAGRT--TRWSALPAPSC 372
                    |:|   ..:...:|.|....:..|....:|    .:|||....|  |:....|...|
Human  1241 LVECVVNCQLSGWTAWTECSQTCGHGGRMSRTRFIIMP----TQGEGRPCPTELTQEKTCPVTPC 1301

  Fly   373 ----RGKW 376
                .|.|
Human  1302 YSWVLGNW 1309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42339NP_572674.3 Somatomedin_B <53..79 CDD:279385 5/48 (10%)
TSP1 86..136 CDD:214559 18/59 (31%)
THSD7BNP_001303278.1 TSP1 182..233 CDD:214559
TSP_1 340..388 CDD:387593
TSP1 605..660 CDD:214559
TSP1 1251..1301 CDD:214559 11/53 (21%)
TSP1 1374..1430 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1583..1606
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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